RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 ZNF582Q96NG8 517 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TEFMQ96QE5 360 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CITED1Q99966 193 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CCDC32Q9BV29 185 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 POFUT1Q9H488 388 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 METTL7AQ9H8H3 244 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GALNT9Q9HCQ5 603 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 B3GAT2Q9NPZ5 323 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CNOT2Q9NZN8 540 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SEC14L4Q9UDX3 406 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FBXW2Q9UKT8 454 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZFR2Q9UPR6 939 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RPL36Q9Y3U8 105 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A3GALT2U3KPV4 340 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 UQCRC2P22695 453 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HMGA2P52926 109 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PPP2CBP62714 309 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PPP2CAP67775 309 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KRR1Q13601 381 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KHDRBS2Q5VWX1 349 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF57Q68EA5 555 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 Q8N402 240 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR2L2Q8NH16 312 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 POP5Q969H6 163 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ADIPOR1Q96A54 375 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RNFT2Q96EX2 444 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 WDR34Q96EX3 536 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM46AQ96IP4 442 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MSLNLQ96KJ4 702 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MAGEB10Q96LZ2 347 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 BBS4Q96RK4 519 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC17A9Q9BYT1 436 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZCCHC3Q9NUD5 404 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MLXQ9UH92 298 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SPACA6W5XKT8 324 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 COL4A3Q01955 1670 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 IGKV1-8A0A0C4DH67 115 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TO15178 435 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ADH1BP00325 375 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PDGFBP01127 241 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SYPP08247 313 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC2A2P11168 524 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TACR3P29371 465 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GIPRP48546 466 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 STXBP1P61764 594 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RPL6Q02878 288 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM52BQ4KMG9 183 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM27D1Q5T7N8 215 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLX4IPQ5VYV7 408 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF793Q6ZN11 406 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR13C2Q8NGS9 318 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 APOBEC4Q8WW27 367 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC25A46Q96AG3 418 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PDXPQ96GD0 296 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SOX7Q9BT81 388 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MS4A8Q9BY19 250 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PIGUQ9H490 435 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MED20Q9H944 212 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MRPS30Q9NP92 439 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NDUFB11Q9NX14 153 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A4GNTQ9UNA3 340 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC9A8Q9Y2E8 581 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CSNK1G3Q9Y6M4 447 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KIAA1549LQ6ZVL6 1849 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NUP210Q8TEM1 1887 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A075B6Q4 140 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A0X1KG70 313 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A1W2PPV9 198 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A1W2PQF6 199 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 POM121BA6NF01 834 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ISM1B1AKI9 464 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SGCEO43556 437 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ADAP00813 363 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CSTBP04080 98 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MYL12AP19105 171 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ETV6P41212 452 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PXNP49023 591 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TGM3Q08188 693 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ILKQ13418 452 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KLHL26Q53HC5 615 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CCNJQ5T5M9 372 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HEPHL1Q6MZM0 1159 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SMARCD3Q6STE5 483 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PLET1Q6UQ28 207 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 Q6ZS52 159 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C17orf64Q86WR6 236 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF679Q8IYX0 411 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR8D4Q8NGM9 314 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZBED6CLQ96FA7 236 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ABHD1Q96SE0 405 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SPATA9Q9BWV2 254 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RNF32Q9H0A6 362 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RNF121Q9H920 327 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 BEX1Q9HBH7 125 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C3orf14Q9HBI5 128 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ALG5Q9Y673 324 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MAU2Q9Y6X3 613 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms