RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 LIPNQ5VXI9 398 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 EMBQ6PCB8 327 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 CLECL1Q8IZS7 167 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 CNPY4Q8N129 248 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 ZNF563Q8TA94 476 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 AGR3Q8TD06 166 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 BHLHE41Q9C0J9 482 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
CDK5RAP3-226ENST00000583182 LOC390937A0A1W2PQ73 354 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 DUXAA6NLW8 204 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZNF23P17027 643 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 KRT4P19013 534 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CCNA2P20248 432 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CLK1P49759 484 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ATP6AP1LQ52LC2 224 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TYW3Q6IPR3 259 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 BHLHB9Q6PI77 547 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 HMGN2P46Q86SG4 172 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZG16BQ96DA0 208 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PRPF18Q99633 342 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR51I1Q9H343 314 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMEM181Q9P2C4 612 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC9A8Q9Y2E8 581 aa12.89□□□□□ -0.35
CDK5RAP3-226ENST00000583182 RNF103-CHMP3A0A140T963 221 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SMIM23A6NLE4 172 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CLDN24A6NM45 220 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 KLF11O14901 512 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 IMPDH2P12268 514 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PRPS1L1P21108 318 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 MPGP29372 298 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PRPS1P60891 318 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SNRPD2P62316 118 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TGFBR3Q03167 851 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 FUT5Q11128 374 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 HIKESHIQ53FT3 197 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 AP1ARQ63HQ0 302 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 C16orf62Q7Z3J2 963 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 GSPT2Q8IYD1 628 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 VRK1Q99986 396 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PARPBPQ9NWS1 579 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 MID2Q9UJV3 735 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 WDR45Q9Y484 360 aa12.88□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMED7-TICAM2A0A0A6YYA0 188 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 IGHV1-18A0A0C4DH31 117 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 LRP5LA4QPB2 252 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 NPHS1O60500 1241 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 WNT11O96014 354 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR12D1P0DN82 309 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 G6PDP11413 515 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CDH2P19022 906 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ALDH3A1P30838 453 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ARRB2P32121 409 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SERPINF1P36955 418 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC35A1P78382 337 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PGS1Q32NB8 556 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR4F3Q6IEY1 312 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 FRRS1Q6ZNA5 592 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC46A3Q7Z3Q1 461 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 RFLNBQ8N5W9 214 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZIC4Q8N9L1 334 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 MIPOL1Q8TD10 442 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 RAB8BQ92930 207 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 MECRQ9BV79 373 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SAP130Q9H0E3 1048 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CA10Q9NS85 328 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 EXD2Q9NVH0 621 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMED7Q9Y3B3 224 aa12.87□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZC3H12DA2A288 527 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 AP3D1O14617 1153 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 WIPF1O43516 503 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TCF21O43680 179 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 EIF1BO60739 113 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 GUSBP08236 651 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ITGA2P17301 1181 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 IL2RGP31785 369 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 KCNJ10P78508 379 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms