RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SNAP29O95721 258 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 OXSR1O95747 527 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 ONECUT2O95948 504 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 LGI1O95970 557 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 HEXBP07686 556 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 GUSBP08236 651 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 CT62P0C5K7 136 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 PRKACGP22612 351 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 IFNGR2P38484 337 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 RGS8P57771 180 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 PSPHP78330 225 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 ADORA2A-AS1P86434 159 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 TLE4Q04727 773 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 FUT5Q11128 374 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 PPP1R8Q12972 351 aaKnown RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 DUSP8Q13202 625 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 BLMHQ13867 455 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 GANABQ14697 944 aaKnown RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 CDSNQ15517 529 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 GPR68Q15743 365 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 MAPK11Q15759 364 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 MICAQ29983 383 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 FLYWCH1Q4VC44 716 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 DCST1Q5T197 706 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 TBPL2Q6SJ96 375 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 UGT2A3Q6UWM9 527 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 NCCRP1Q6ZVX7 275 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 NDUFAF7Q7L592 441 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 WDR53Q7Z5U6 358 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 RANBP3LQ86VV4 465 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 OR52J3Q8NH60 311 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 OR14A16Q8NHC5 309 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 PSMF1Q92530 271 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 ZBTB8AQ96BR9 441 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 RMND5BQ96G75 393 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 SDF2Q99470 211 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 APOL4Q9BPW4 351 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 OR10A5Q9H207 317 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 TOR3AQ9H497 397 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 RIBC2Q9H4K1 309 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 KRCC1Q9NPI7 259 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 NECTIN3Q9NQS3 549 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 LANCL2Q9NS86 450 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 STMN3Q9NZ72 180 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 ABI3Q9P2A4 366 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 MKLN1Q9UL63 735 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 ERVK-19Q9WJR5 959 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 ZNF443Q9Y2A4 671 aaPredicted RBP9.33□□□□□ -0.92
SS18-221ENST00000582448 MYRFQ9Y2G1 1151 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 POFUT2Q9Y2G5 429 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 LYVE1Q9Y5Y7 322 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 APCP25054 2843 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 PKDREJQ9NTG1 2253 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 ARRDC5A6NEK1 342 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 AGAP5A6NIR3 686 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 FAAHO00519 579 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 ZNHIT1O43257 154 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 SLC19A2O60779 497 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 CLDN14O95500 239 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 SERPINA7P05543 415 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 ITGAMP11215 1152 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 COX6A1P12074 109 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 KRT20P35900 424 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 RFX3P48380 749 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 GTF2A1P52655 376 aaPredicted RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 HMGA2P52926 109 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 TAS2R41P59536 307 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 DCAF7P61962 342 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 FUT7Q11130 342 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 INAQ16352 499 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 DECR1Q16698 335 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 EXOC3L2Q2M3D2 409 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 ABHD17BQ5VST6 288 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 KDM4DQ6B0I6 523 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 TYW3Q6IPR3 259 aaKnown RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 FRRS1Q6ZNA5 592 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 RRM2BQ7LG56 351 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 TMEM179BQ7Z7N9 219 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 OFCC1Q8IZS5 231 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 HS3ST5Q8IZT8 346 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 ZNF786Q8N393 782 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 GPR32P1Q8NGA4 272 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 DOK4Q8TEW6 326 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 PIK3R3Q92569 461 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 SENP5Q96HI0 755 aaPredicted RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 FBXL20Q96IG2 436 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 PRRC1Q96M27 445 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 YTHDF1Q9BYJ9 559 aaKnown RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 POLR2J2Q9GZM3 115 aaKnown RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 ZNF350Q9GZX5 532 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 HOXD1Q9GZZ0 328 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 POLR2J3Q9H1A7 115 aaKnown RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 NMNAT1Q9HAN9 279 aaPredicted RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 PAPOLBQ9NRJ5 636 aaKnown RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 FAM118AQ9NWS6 357 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 VNN3Q9NY84 501 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms