RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 C3orf33Q6P1S2 294 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 TTC33Q6PID6 262 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 ZNF730Q6ZMV8 503 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 MEX3DQ86XN8 651 aaKnown RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 HS3ST5Q8IZT8 346 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 PFN4Q8NHR9 129 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 STK35Q8TDR2 534 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 FAR1Q8WVX9 515 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 TMEM239Q8WW34 195 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 ACOT11Q8WXI4 607 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 ABTB1Q969K4 478 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 TAAR8Q969N4 342 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 KTI12Q96EK9 354 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 DNAJA3Q96EY1 480 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 ARL5BQ96KC2 179 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 HS6ST2Q96MM7 605 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 BDH2Q9BUT1 245 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 LDAHQ9H6V9 325 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 RNPEPL1Q9HAU8 725 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 MEPEQ9NQ76 525 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 SERINC1Q9NRX5 453 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 C6orf203Q9P0P8 240 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 STX18Q9P2W9 335 aaKnown RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 MAGED1Q9Y5V3 778 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 AP4B1Q9Y6B7 739 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 DOCK7Q96N67 2140 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 A0A0J9YW62 118 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 SAC3D1A6NKF1 404 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 H0YC42 278 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 H3BML4 177 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 LINC01387J3KSC0 135 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 KPNA4O00629 521 aaPredicted RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 AQP7O14520 342 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 ZNHIT1O43257 154 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 E2F6O75461 281 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 ACTL6AO96019 429 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 TFPIP10646 304 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 FPR1P21462 350 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 PRKACGP22612 351 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 TDGF1P3P51864 188 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 MAP2K6P52564 334 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 SUCLG1P53597 346 aaKnown RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 TPD52P55327 224 aaPredicted RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 CLDN18P56856 261 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 HSF1Q00613 529 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 CRYZQ08257 329 aaKnown RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 C19orf57Q0VDD7 668 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 NFATC3Q12968 1075 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 GK3PQ14409 553 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 MICAQ29983 383 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
RFFL-210ENST00000582308 SYT14P1Q58G82 188 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 NHSL2Q5HYW2 709 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 C1orf140Q5VVS0 124 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 ANKRD34AQ69YU3 496 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 SHQ1Q6PI26 577 aaKnown RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 MBOAT2Q6ZWT7 520 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 FGD2Q7Z6J4 655 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 ZER1Q7Z7L7 766 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 GGNQ86UU5 652 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 EPHX4Q8IUS5 362 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 CHERPQ8IWX8 916 aaKnown RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 NRMQ8IXM6 262 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 RNF113BQ8IZP6 322 aaKnown RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 ICA1LQ8NDH6 482 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 OR4K5Q8NGD3 323 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 OR9Q2Q8NGE9 314 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 OR5K1Q8NHB7 308 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 GIPC3Q8TF64 312 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 SMPDL3BQ92485 455 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 NRBF2Q96F24 287 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 GPR137Q96N19 417 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 TIMP4Q99727 224 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 SLX1AQ9BQ83 275 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 PTDSS2Q9BVG9 487 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 POTEKPQ9BYX7 375 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 SLC19A3Q9BZV2 496 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 EXO5Q9H790 373 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 C20orf141Q9NUB4 165 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 STOML1Q9UBI4 398 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 TNFRSF10DQ9UBN6 386 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 TMCC3Q9ULS5 477 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 MED31Q9Y3C7 131 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 CFAP46Q8IYW2 2715 aa8.58□□□□□ -1.04
RFFL-210ENST00000582308 PHF3Q92576 2039 aaKnown RBP8.58□□□□□ -1.04
RFFL-210ENST00000582308 POLEQ07864 2286 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 PCNX1Q96RV3 2341 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 TRAV36DV7A0A075B6V5 113 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 A0A1B0GTH9 108 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 A0A1W2PNR3 127 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 ENO4A6NNW6 628 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 TTLL8A6PVC2 850 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 LRRN3E7EW58 273 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 G3V2T6 193 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 PDLIM1O00151 329 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 TNFSF11O14788 317 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 OR10H3O60404 316 aa8.57□□□□□ -1.04
RFFL-210ENST00000582308 CCNB2O95067 398 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms