RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 RAD21L1Q9H4I0 556 aa9.54□□□□□ -0.88
TOP3A-210ENST00000580713 TPT1P8Q9HAU6 139 aa9.54□□□□□ -0.88
TOP3A-210ENST00000580713 SIRT3Q9NTG7 399 aaPredicted RBP9.54□□□□□ -0.88
TOP3A-210ENST00000580713 MED11Q9P086 117 aa9.54□□□□□ -0.88
TOP3A-210ENST00000580713 CORO2BQ9UQ03 480 aa9.54□□□□□ -0.88
TOP3A-210ENST00000580713 MEGF8Q7Z7M0 2845 aa9.54□□□□□ -0.88
TOP3A-210ENST00000580713 CADP27708 2225 aa9.54□□□□□ -0.88
TOP3A-210ENST00000580713 MALRD1Q5VYJ5 2156 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 DYSFO75923 2080 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 RNF103-CHMP3A0A140T963 221 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 B4DXG7 233 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 LINC01387J3KSC0 135 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 EIF1AYO14602 144 aaKnown RBP9.53□□□□□ -0.88
TOP3A-210ENST00000580713 TO15178 435 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 DNAJA2O60884 412 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 RAMP1O60894 148 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 SS18L1O75177 396 aaPredicted RBP9.53□□□□□ -0.88
TOP3A-210ENST00000580713 CIB2O75838 187 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 SLITRK5O94991 958 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 SYNGR4O95473 234 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 KRT75O95678 551 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 ATP1B1P05026 303 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 IL11P20809 199 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 ME2P23368 584 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 ADH6P28332 368 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 CCT3P49368 545 aaKnown RBP9.53□□□□□ -0.88
TOP3A-210ENST00000580713 CDH11P55287 796 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 LIPEQ05469 1076 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 CEACAM7Q14002 265 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 TAB1Q15750 504 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 PRICKLE4Q2TBC4 344 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 SPATS1Q496A3 300 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 TMEM107Q6UX40 140 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 CLEC4FQ8N1N0 589 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 RFLNBQ8N5W9 214 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 RNF148Q8N7C7 305 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 OR2M3Q8NG83 312 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 OR5AK3PQ8NH89 298 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 SFXN5Q8TD22 340 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 HSD17B8Q92506 261 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 MOAP1Q96BY2 351 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 SLC35A4Q96G79 324 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 GRIP2Q9C0E4 1043 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 IKZF5Q9H5V7 419 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 PTGES2Q9H7Z7 377 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 FBXO34Q9NWN3 711 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 MAT2BQ9NZL9 334 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 STOML1Q9UBI4 398 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 MCTS1Q9ULC4 181 aaKnown RBP9.53□□□□□ -0.88
TOP3A-210ENST00000580713 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
TOP3A-210ENST00000580713 GMEB1Q9Y692 573 aa9.53□□□□□ -0.88
TOP3A-210ENST00000580713 YLPM1P49750 1951 aaKnown RBP9.53□□□□□ -0.88
TOP3A-210ENST00000580713 MGAM2Q2M2H8 2515 aa9.52□□□□□ -0.88
TOP3A-210ENST00000580713 PRORSD1PA6NEY8 169 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 DPRXA6NFQ7 191 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 CBX7O95931 251 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 HSD17B1P14061 328 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ITGA2P17301 1181 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 EGR1P18146 543 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 TCN1P20061 433 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 GSK3BP49841 420 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 GAS1P54826 345 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 CORO7P57737 925 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 PRR5P85299 388 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 MGAT2Q10469 447 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 TP53BP2Q13625 1128 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 GANABQ14697 944 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 LTB4RQ15722 352 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 TRMT12Q53H54 448 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ZNF628Q5EBL2 1059 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SAXO2Q658L1 398 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SZRD1Q7Z422 152 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 C6orf120Q7Z4R8 191 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 FADS6Q8N9I5 356 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 OR56A1Q8NGH5 318 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 OR10A6Q8NH74 314 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SGMS2Q8NHU3 365 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 PNPT1Q8TCS8 783 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ZNF675Q8TD23 568 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 PROX1Q92786 737 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 KAT2AQ92830 837 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 EFHD2Q96C19 240 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 CCDC124Q96CT7 223 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ZMYND19Q96E35 227 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ELP4Q96EB1 424 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 NEURL3Q96EH8 262 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 FAM120BQ96EK7 910 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SLC35G5Q96KT7 338 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 KCTD14Q9BQ13 255 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 KAT8Q9H7Z6 458 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 C3orf14Q9HBI5 128 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SDHAF3Q9NRP4 125 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 GLRX2Q9NS18 164 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ZCCHC3Q9NUD5 404 aaKnown RBP9.52□□□□□ -0.89
TOP3A-210ENST00000580713 CD300AQ9UGN4 299 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 SLC7A8Q9UHI5 535 aa9.52□□□□□ -0.89
TOP3A-210ENST00000580713 ZNF639Q9UID6 485 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms