RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 GDF7Q7Z4P5 450 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LILRB4Q8NHJ6 448 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TP53INP1Q96A56 240 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LIN37Q96GY3 246 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LCORQ96JN0 433 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OPALINQ96PE5 141 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MMP27Q9H306 513 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PCDHGA3Q9Y5H0 932 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PCDHGA1Q9Y5H4 931 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FRYQ5TBA9 3013 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 AKAP13Q12802 2813 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C9J4A7 227 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MYL12BO14950 172 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RNF4P78317 190 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZMAT1Q5H9K5 638 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TUBA3EQ6PEY2 450 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 USP43Q70EL4 1123 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR8D4Q8NGM9 314 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DEPDC7Q96QD5 511 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LPAR4Q99677 370 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PRRX2Q99811 253 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 POLDIP3Q9BY77 421 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HHATLQ9HCP6 504 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CCDC187A0A096LP49 1063 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TRBV11-1A0A0K0K1C0 115 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CCRL2O00421 344 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RGS5O15539 181 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 IFI6P09912 130 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RPS4Y1P22090 263 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ENPP1P22413 925 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC15A1P46059 708 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF136P52737 540 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TSPAN31Q12999 210 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HLA-DQA1Q5Y7H0 255 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM205Q6UW68 189 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C6orf15Q6UXA7 325 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CD300LDQ6UXZ3 194 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RANBP3LQ86VV4 465 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ACOT11Q8WXI4 607 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC38A2Q96QD8 506 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HS3ST3B1Q9Y662 390 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MRPS18BQ9Y676 258 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM200CA6NKL6 621 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DBIP07108 87 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PIPP12273 146 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HTR2AP28223 471 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RPS19P39019 145 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CDK5Q00535 292 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CAMK2BQ13554 666 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SPHARQ15513 63 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CD226Q15762 336 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 EIPR1Q53HC9 387 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RSBN1Q5VWQ0 802 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FCRLBQ6BAA4 426 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HSDL2Q6YN16 418 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC29A4Q7RTT9 530 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZFP41Q8N8Y5 198 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 KBTBD8Q8NFY9 601 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CT55Q8WUE5 264 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CHAC2Q8WUX2 184 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF582Q96NG8 517 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LRFN5Q96NI6 719 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 BARHL1Q9BZE3 327 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SPRY4Q9C004 299 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 POLR2J2Q9GZM3 115 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SNTG1Q9NSN8 517 aa11.61□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ICOSLGO75144 302 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ABCD3P28288 659 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OTX2P32243 289 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 UGT2B10P36537 528 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CD79BP40259 229 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OMPP47874 163 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TUBA1BP68363 451 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C1DQ13901 141 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DECR1Q16698 335 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 BTBD16Q32M84 506 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM201Q5SNT2 666 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR2G6Q5TZ20 316 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MEDAGQ5VYS4 303 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 KIRREL2Q6UWL6 708 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CCBE1Q6UXH8 406 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TUBA1AQ71U36 451 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GDPD3Q7L5L3 318 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GLRX5Q86SX6 157 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FAM26EQ8N5C1 309 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CELF2-AS1Q8N7Q2 184 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR2Y1Q8NGV0 311 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NR4A3Q92570 626 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MND1Q9BWT6 205 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C12orf49Q9H741 205 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MARCH7Q9H992 704 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SDK2Q58EX2 2172 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OIP5O43482 229 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 AK1P00568 194 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DRD5P21918 477 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 S100A5P33763 92 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms