RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PIGMQ9H3S5 423 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 COQ10BQ9H8M1 238 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 TMEM181Q9P2C4 612 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 ABCD2Q9UBJ2 740 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 EMC9Q9Y3B6 208 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 A0A1W2PNV4 684 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 A8MVM7 634 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 EEF1E1-BLOC1S5C9J1V9 151 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 M0R3H8 397 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 CXCR6O00574 342 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 EEF1E1O43324 174 aaKnown RBP13.61□□□□□ -0.23
LITAF-217ENST00000575426 PRKD3O94806 890 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 PNMTP11086 282 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 CD247P20963 164 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 ASCL1P50553 236 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 SIRPAP78324 504 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 MYBPHQ13203 477 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 RNPS1Q15287 305 aaKnown RBP13.61□□□□□ -0.23
LITAF-217ENST00000575426 OR1Q1Q15612 314 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 NRF1Q16656 503 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 ULK3Q6PHR2 472 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 FCRLAQ7L513 359 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 GPR32P1Q8NGA4 272 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 DNAJA3Q96EY1 480 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 SLC47A1Q96FL8 570 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 GMPPAQ96IJ6 420 aaPredicted RBP13.61□□□□□ -0.23
LITAF-217ENST00000575426 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 NAA11Q9BSU3 229 aaPredicted RBP13.61□□□□□ -0.23
LITAF-217ENST00000575426 RSPO3Q9BXY4 272 aaPredicted RBP13.61□□□□□ -0.23
LITAF-217ENST00000575426 POTEKPQ9BYX7 375 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 OR11A1Q9GZK7 315 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 C12orf10Q9HB07 376 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 ADPRHL2Q9NX46 363 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 SH3GLB1Q9Y371 365 aa13.61□□□□□ -0.23
LITAF-217ENST00000575426 A0A1B0GWA3 101 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 B2RBV5 119 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 FMO6PO60774 539 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
LITAF-217ENST00000575426 GPIP06744 558 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 CALB2P22676 271 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 COL8A1P27658 744 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 IDUAP35475 653 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 SLC35A1P78382 337 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 SLC25A3Q00325 362 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 BNIP2Q12982 314 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 CYBRD1Q53TN4 286 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 ALG10BQ5I7T1 473 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 ATG4DQ86TL0 474 aaPredicted RBP13.6□□□□□ -0.23
LITAF-217ENST00000575426 COMTD1Q86VU5 262 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 RELL2Q8NC24 303 aaPredicted RBP13.6□□□□□ -0.23
LITAF-217ENST00000575426 STK35Q8TDR2 534 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 FAM162AQ96A26 154 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 TPD52L3Q96J77 140 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 CDRT15Q96T59 188 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 PRR14Q9BWN1 585 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 TAPBPLQ9BX59 468 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 KLHL9Q9P2J3 617 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 FOXD3Q9UJU5 478 aaPredicted RBP13.6□□□□□ -0.23
LITAF-217ENST00000575426 PACSIN3Q9UKS6 424 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 CLEC4AQ9UMR7 237 aa13.6□□□□□ -0.23
LITAF-217ENST00000575426 IGHV3-15A0A0B4J1V0 119 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 DNPH1O43598 174 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 EIF1BO60739 113 aaKnown RBP13.59□□□□□ -0.23
LITAF-217ENST00000575426 HTR2AP28223 471 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 GRNP28799 593 aaKnown RBP13.59□□□□□ -0.23
LITAF-217ENST00000575426 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
LITAF-217ENST00000575426 SELENOWP63302 87 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 RASGEF1BQ0VAM2 473 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 SAMD4BQ5PRF9 694 aaKnown RBP13.59□□□□□ -0.23
LITAF-217ENST00000575426 TMEM201Q5SNT2 666 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 ZNF613Q6PF04 617 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 C5orf46Q6UWT4 87 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 FAM214BQ7L5A3 538 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 TRPM8Q7Z2W7 1104 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 LUZP2Q86TE4 346 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 CARM1Q86X55 608 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 DEFB107AQ8IZN7 70 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 OR6T1Q8NGN1 323 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 RNF128Q8TEB7 428 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 TACO1Q9BSH4 297 aaKnown RBP13.59□□□□□ -0.23
LITAF-217ENST00000575426 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
LITAF-217ENST00000575426 PROCRQ9UNN8 238 aa13.59□□□□□ -0.23
LITAF-217ENST00000575426 ZC3H12DA2A288 527 aaKnown RBP13.58□□□□□ -0.24
LITAF-217ENST00000575426 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
LITAF-217ENST00000575426 MSTNO14793 375 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 SS18L1O75177 396 aaPredicted RBP13.58□□□□□ -0.24
LITAF-217ENST00000575426 TNFSF13O75888 250 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 AHSA1O95433 338 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 ZNF682O95780 498 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 COX6B1P14854 86 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 FPR1P21462 350 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 GTF2E2P29084 291 aaKnown RBP13.58□□□□□ -0.24
LITAF-217ENST00000575426 UQCRC1P31930 480 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 IFNA8P32881 189 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 CRYBA2P53672 197 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 CEACAM7Q14002 265 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 OR7A5Q15622 319 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 ENTPD8Q5MY95 495 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms