RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TRMT61BQ9BVS5 477 aaKnown RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 GNG8Q9UK08 70 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 CA5BQ9Y2D0 317 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 RPH3AQ9Y2J0 694 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 TRBV2A0A0J9YWF9 115 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 E9PQ18 207 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 F12P00748 615 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 CNR1P21554 472 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 ADH7P40394 386 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 NAA10P41227 235 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 SOX2P48431 317 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 TBPL1P62380 186 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 TSPAN31Q12999 210 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 SERTAD2Q14140 314 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 PEA15Q15121 130 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 HFEQ30201 348 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 KRBOX4Q5JUW0 171 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 FAM109BQ6ICB4 259 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 KIAA1211LQ6NV74 962 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 LRRTM4Q86VH4 590 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 PUSL1Q8N0Z8 303 aaKnown RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 DNAAF1Q8NEP3 725 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 OR11G2Q8NGC1 345 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 OR4C6Q8NH72 309 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 OR14A16Q8NHC5 309 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 UBE2E3Q969T4 207 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 COL26A1Q96A83 441 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 LRIG1Q96JA1 1093 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 DERL3Q96Q80 235 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 MCHR1Q99705 422 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 WFDC6Q9BQY6 131 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 PIGMQ9H3S5 423 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 TCF7L1Q9HCS4 588 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 DPP7Q9UHL4 492 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 ING1Q9UK53 422 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-212ENST00000574799 A4GNTQ9UNA3 340 aa8.88□□□□□ -0.99
CCDC40-212ENST00000574799 OR6C68A6NDL8 312 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 WRBO00258 174 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 MAGEB4O15481 346 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 MPC1LP0DKB6 136 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 EPCAMP16422 314 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 S100PP25815 95 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 RFC3P40938 356 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 NCBP2P52298 156 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SIM1P81133 766 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 DEFA6Q01524 100 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 GUCA2BQ16661 112 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 PLEKHS1Q5SXH7 462 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF660Q6AZW8 331 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 UNQ6126/PRO20091Q6UXV3 157 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 TAF8Q7Z7C8 310 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 FAM98AQ8NCA5 519 aaKnown RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF740Q8NDX6 193 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SYNPRQ8TBG9 265 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SMPDL3BQ92485 455 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 S100PBPQ96BU1 408 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SEC22AQ96IW7 307 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF251Q9BRH9 671 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CAPN10Q9HC96 672 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ZFP57Q9NU63 452 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 TAS2R5Q9NYW4 299 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF629Q9UEG4 869 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 GTF2A1LQ9UNN4 478 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 NPFFR2Q9Y5X5 522 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SIRT4Q9Y6E7 314 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CXorf51AA0A1B0GTR3 108 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 AGPAT2O15120 278 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 NTN1O95631 604 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CXCL14O95715 111 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 STATHP02808 62 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 LIPCP11150 499 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CSF2RBP32927 897 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 NR0B1P51843 470 aaKnown RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 TGM3Q08188 693 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 MAPK14Q16539 360 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SCGB2B2Q4G0G5 96 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 FAM71CQ8NEG0 241 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 VN1R2Q8NFZ6 395 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ARL11Q969Q4 196 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 HSPA12BQ96MM6 686 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 DMRT3Q9NQL9 472 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 MED9Q9NWA0 146 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 RNF215Q9Y6U7 377 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 POM121BA6NF01 834 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 PYCARD-AS1I3L0S3 204 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 TSPAN6O43657 245 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SOCS5O75159 536 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SEMA7AO75326 666 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 NDUFS6O75380 124 aaKnown RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 S100A8P05109 93 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CD2P06729 351 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CISD3P0C7P0 127 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 DLSTP36957 453 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 SSR2P43308 183 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 MAPK8P45983 427 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF155Q12901 538 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-212ENST00000574799 AIMP2Q13155 320 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms