RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SMPD3Q9NY59 655 aaPredicted RBP2.72□□□□□ -1.97
CDC27-216ENST00000574304 PHF11Q9UIL8 331 aa2.72□□□□□ -1.97
CDC27-216ENST00000574304 HOOK1Q9UJC3 728 aaKnown RBP2.72□□□□□ -1.97
CDC27-216ENST00000574304 SH3TC1Q8TE82 1336 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 IGKV1D-8A0A087WSZ0 117 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 IGHV1OR21-1A0A087WYE8 117 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 LAD1O00515 517 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 RS1O15537 224 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 PRPSAP2O60256 369 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 FOXH1O75593 365 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 UFL1O94874 794 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 H2BFMP0C1H6 154 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 ZNF823P16415 610 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 HPCAL1P37235 193 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 DAP3P51398 398 aaKnown RBP2.71□□□□□ -1.98
CDC27-216ENST00000574304 AP3M2P53677 418 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 RIPK1Q13546 671 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 OR52W1Q6IF63 320 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 TMIGD1Q6UXZ0 262 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 C6orf120Q7Z4R8 191 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 FAM9BQ8IZU0 186 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 FTMTQ8N4E7 242 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 DHRSXQ8N5I4 330 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 ATP6V0D2Q8N8Y2 350 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 OR10G3Q8NGC4 313 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 OR6C4Q8NGE1 309 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 FANK1Q8TC84 345 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 ARPC1AQ92747 370 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 AATFQ9NY61 560 aaKnown RBP eCLIP2.71□□□□□ -1.98
CDC27-216ENST00000574304 GNG12Q9UBI6 72 aa2.71□□□□□ -1.98
CDC27-216ENST00000574304 ZNF282Q9UDV7 671 aaPredicted RBP2.71□□□□□ -1.98
CDC27-216ENST00000574304 A0A1W2PNV4 684 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 PLEKP08567 350 aaPredicted RBP2.7□□□□□ -1.98
CDC27-216ENST00000574304 PNMA6AP0CW24 399 aaPredicted RBP2.7□□□□□ -1.98
CDC27-216ENST00000574304 HOXA9P31269 272 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 SHMT2P34897 504 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 RPS9P46781 194 aaKnown RBP2.7□□□□□ -1.98
CDC27-216ENST00000574304 TFPI2P48307 235 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 ACADVLP49748 655 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 HSD17B7P56937 341 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 ACTA1P68133 377 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 MXD4Q14582 209 aaPredicted RBP2.7□□□□□ -1.98
CDC27-216ENST00000574304 PSG5Q15238 335 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 PIGGQ5H8A4 983 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 GPRC6AQ5T6X5 926 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 PRSS41Q7RTY9 318 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 RDH10Q8IZV5 341 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 ARL10Q8N8L6 244 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 NPBQ8NG41 125 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 ROGDIQ9GZN7 287 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 TBK1Q9UHD2 729 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 TRAF3IP3Q9Y228 551 aa2.7□□□□□ -1.98
CDC27-216ENST00000574304 PDS5BQ9NTI5 1447 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 A0A1B0GUS0 222 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 C11orf94C9JXX5 98 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 LGALS2P05162 132 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 POLR2EP19388 210 aaKnown RBP2.69□□□□□ -1.98
CDC27-216ENST00000574304 CXCR2P25025 360 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 MAPK3P27361 379 aaPredicted RBP2.69□□□□□ -1.98
CDC27-216ENST00000574304 PTGDSP41222 190 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 KIR2DS4P43632 304 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 DLX1P56177 255 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 SLAQ13239 276 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 BOLA3Q53S33 107 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 CTRB2Q6GPI1 263 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 FAM71F2Q6NXP2 309 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 ZNF621Q6ZSS3 439 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 ZNF571Q7Z3V5 609 aaPredicted RBP2.69□□□□□ -1.98
CDC27-216ENST00000574304 ACOT1Q86TX2 421 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 LRRC43Q8N309 656 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 CLDN19Q8N6F1 224 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 OR9G1Q8NH87 305 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 ZNF596Q8TC21 504 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 TIMD4Q96H15 378 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 CEP170P1Q96L14 293 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 P2RY13Q9BPV8 354 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 ZNF670Q9BS34 389 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 POLR1EQ9GZS1 481 aaKnown RBP2.69□□□□□ -1.98
CDC27-216ENST00000574304 C20orf85Q9H1P6 137 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 TPK1Q9H3S4 243 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 SUDS3Q9H7L9 328 aaPredicted RBP2.69□□□□□ -1.98
CDC27-216ENST00000574304 FOLH1BQ9HBA9 442 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 SIGLEC8Q9NYZ4 499 aa2.69□□□□□ -1.98
CDC27-216ENST00000574304 SLIT3O75094 1523 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 A0A087WZY1 265 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 A0A0G2JLM5 398 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 A0A0G2JN53 185 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 NPIPA7E9PJI5 369 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 DCTN6O00399 190 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 OR1F1O43749 312 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 AIREO43918 545 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 CXCL13O43927 109 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 TPST2O60704 377 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 LRATO95237 230 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 NPIPA8P0DM63 369 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 CALCBP10092 127 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 HTR2AP28223 471 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 OTX2P32243 289 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 ZNF136P52737 540 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 CRISP3P54108 245 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms