RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 KCNN3Q9UGI6 736 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 GNG8Q9UK08 70 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 FBXL21Q9UKT6 434 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 FLVCR2Q9UPI3 526 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 SPEF1Q9Y4P9 236 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 A0A0C4DFX4 3053 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 LOC105371267A0A1B0GV96 52 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 B8ZZF3 427 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 SLC31A1O15431 190 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 PEX14O75381 377 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 GATBO75879 557 aaKnown RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 ATP1B1P05026 303 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 NGFRP08138 427 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 ADRB1P08588 477 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 HIST1H1CP16403 213 aaKnown RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 AK4P27144 223 aaPredicted RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 ZP1P60852 638 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 POU6F2P78424 691 aaPredicted RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 CRYZQ08257 329 aaKnown RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 LINGO2Q7L985 606 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 SYS1Q8N2H4 156 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 SLC22A18Q96BI1 424 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 ZNF436Q9C0F3 470 aaPredicted RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 METTL17Q9H7H0 456 aaPredicted RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 DPP7Q9UHL4 492 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 PCDHGA9Q9Y5G4 932 aaKnown RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 A0A087WV62 115 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 GMDSO60547 372 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 EDNRAP25101 427 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 FHL1Q13642 323 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 RUNX3Q13761 415 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 UBE2NLQ5JXB2 153 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 RPL22L1Q6P5R6 122 aaKnown RBP14.4□□□□□ -0.1
NUP88-207ENST00000573584 ZNF527Q8NB42 609 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 LRRC20Q8TCA0 184 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 CCDC120Q96HB5 630 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 SERTAD3Q9UJW9 196 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 RCE1Q9Y256 329 aa14.4□□□□□ -0.1
NUP88-207ENST00000573584 SCN2AQ99250 2005 aa14.4□□□□□ -0.11
NUP88-207ENST00000573584 UNC80Q8N2C7 3258 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 CIB4A0PJX0 185 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ZNF10P21506 573 aaPredicted RBP14.39□□□□□ -0.11
NUP88-207ENST00000573584 GRK1Q15835 563 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ZCCHC12Q6PEW1 402 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ABHD13Q7L211 337 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 TMEM52Q8NDY8 209 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 OMA1Q96E52 524 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 OR2M4Q96R27 311 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 MFRPQ9BY79 579 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 CDCP1Q9H5V8 836 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ZNF275Q9NSD4 429 aaPredicted RBP14.39□□□□□ -0.11
NUP88-207ENST00000573584 UBQLN2Q9UHD9 624 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 MRPS2Q9Y399 296 aaKnown RBP14.39□□□□□ -0.11
NUP88-207ENST00000573584 TEX51A0A1B0GUA7 166 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 PRSS38A1L453 326 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ADAM11O75078 769 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 SCO1O75880 301 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 AK1P00568 194 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 SRMP19623 302 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 SELENOPP49908 381 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 CCR9P51686 369 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 GAS6Q14393 721 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ALG10BQ5I7T1 473 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 TANGO2Q6ICL3 276 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 ZC3H14Q6PJT7 736 aaKnown RBP14.39□□□□□ -0.11
NUP88-207ENST00000573584 PRSS41Q7RTY9 318 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 SLC35F2Q8IXU6 374 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 OR11G2Q8NGC1 345 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 GCDHQ92947 438 aaPredicted RBP14.39□□□□□ -0.11
NUP88-207ENST00000573584 ORAI1Q96D31 301 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 PAWRQ96IZ0 340 aaKnown RBP14.39□□□□□ -0.11
NUP88-207ENST00000573584 RADILQ96JH8 1075 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 RPS6KB2Q9UBS0 482 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 CHRNA9Q9UGM1 479 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 IER3IP1Q9Y5U9 82 aa14.39□□□□□ -0.11
NUP88-207ENST00000573584 RPS10-NUDT3A0A1W2PQS6 291 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 GPR75O95800 540 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CT62P0C5K7 136 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 ZNF250P15622 560 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 LCN1P31025 176 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PSMB10P40306 273 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PUDPQ08623 228 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PRICKLE4Q2TBC4 344 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CDONQ4KMG0 1287 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CLLU1Q5K131 121 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 HES5Q5TA89 166 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 NLRC3Q7RTR2 1065 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 COMMD7Q86VX2 200 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 SLITRK4Q8IW52 837 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 POMGNT2Q8NAT1 580 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CEP76Q8TAP6 659 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
NUP88-207ENST00000573584 HRASLSQ9HDD0 168 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 NOX4Q9NPH5 578 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 NPTNQ9Y639 398 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 ZNF879B4DU55 563 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 GNB5O14775 395 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PSMB1P20618 241 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms