RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 EEF1A1P5Q5VTE0 462 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 C5orf46Q6UWT4 87 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 P4HA3Q7Z4N8 544 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 RBM45Q8IUH3 476 aaKnown RBP15.46■□□□□ 0.07
LITAF-212ENST00000573332 CCDC71Q8IV32 467 aaPredicted RBP15.46■□□□□ 0.07
LITAF-212ENST00000573332 FAM156AQ8NDB6 213 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 VANGL1Q8TAA9 524 aaPredicted RBP15.46■□□□□ 0.07
LITAF-212ENST00000573332 STK35Q8TDR2 534 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 FAM162AQ96A26 154 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 SLC7A6OSQ96CW6 309 aaPredicted RBP15.46■□□□□ 0.07
LITAF-212ENST00000573332 SRXN1Q9BYN0 137 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 OR11A1Q9GZK7 315 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 DCAF13Q9NV06 445 aaKnown RBP15.46■□□□□ 0.07
LITAF-212ENST00000573332 RPS6KA6Q9UK32 745 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 FLNCQ14315 2725 aa15.46■□□□□ 0.07
LITAF-212ENST00000573332 A0A087WUJ7 227 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 SULT2B1O00204 365 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 AQP8O94778 261 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 CLDN14O95500 239 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 SERPINA1P01009 418 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 TCN1P20061 433 aaPredicted RBP15.45■□□□□ 0.06
LITAF-212ENST00000573332 CCNA2P20248 432 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 CTSSP25774 331 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 AGFG1P52594 562 aaKnown RBP15.45■□□□□ 0.06
LITAF-212ENST00000573332 MYBPHQ13203 477 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 GUSBP1Q15486 140 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 GTF2IRD2BQ6EKJ0 949 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 MYO7BQ6PIF6 2116 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 PLXDC2Q6UX71 529 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 LINC00114Q6XXX2 140 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 GTF2IRD2Q86UP8 949 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 TPD52L3Q96J77 140 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 PSMG3-AS1Q96PY0 264 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 GLRX2Q9NS18 164 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 SELENONQ9NZV5 590 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 SAMD4AQ9UPU9 718 aaKnown RBP15.45■□□□□ 0.06
LITAF-212ENST00000573332 SNX13Q9Y5W8 968 aa15.45■□□□□ 0.06
LITAF-212ENST00000573332 NCOA6Q14686 2063 aaPredicted RBP15.45■□□□□ 0.06
LITAF-212ENST00000573332 PHF3Q92576 2039 aaKnown RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 ZC3H12DA2A288 527 aaKnown RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 TRAPPC13A5PLN9 417 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 ELOA3DA6NLF2 546 aaPredicted RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 CHP2O43745 196 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 FZD7O75084 574 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 TMIGD3P0DMS9 266 aaPredicted RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 TNFRSF1BP20333 461 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 OPRM1P35372 400 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 OR1E2P47887 323 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 CDH12P55289 794 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 EGR4Q05215 589 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 ELOA3BQ3SY89 546 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 DNAL1Q4LDG9 190 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 IFI44LQ53G44 452 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 SLC43A2Q8N370 569 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 ELOA3Q8NG57 546 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 ADAMTS16Q8TE57 1224 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 RNF128Q8TEB7 428 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 CA5BP1Q8WTZ4 195 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 GEMIN6Q8WXD5 167 aaKnown RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 SFXN3Q9BWM7 321 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 PRRG4Q9BZD6 226 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 MUC13Q9H3R2 512 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 GP6Q9HCN6 339 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 ACTR3BQ9P1U1 418 aa15.44■□□□□ 0.06
LITAF-212ENST00000573332 KLF2Q9Y5W3 355 aaPredicted RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 USP9XQ93008 2570 aaPredicted RBP15.44■□□□□ 0.06
LITAF-212ENST00000573332 CPSF4LA6NMK7 179 aaKnown RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 DVL2O14641 736 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 ARPC2O15144 300 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 EIF1BO60739 113 aaKnown RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 ATP5HO75947 161 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 LYPD3O95274 346 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 ZNF682O95780 498 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 THY1P04216 161 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 THRBP10828 461 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 IMPDH2P12268 514 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 ENPP1P22413 925 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 IDUAP35475 653 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 MSX2P35548 267 aaPredicted RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 H3F3AP84243 136 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 FOXF2Q12947 444 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 RNPS1Q15287 305 aaKnown RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 CDSNQ15517 529 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 SLC25A35Q3KQZ1 300 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 C1orf140Q5VVS0 124 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 FCRLAQ7L513 359 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 VTCN1Q7Z7D3 282 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 TSPYL5Q86VY4 417 aaPredicted RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 LIX1LQ8IVB5 337 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 OR6S1Q8NH40 331 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 INTS12Q96CB8 462 aaKnown RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 GMPPAQ96IJ6 420 aaPredicted RBP15.43■□□□□ 0.06
LITAF-212ENST00000573332 MPP4Q96JB8 637 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 HSH2DQ96JZ2 352 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 NSMCE2Q96MF7 247 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 BTBD10Q9BSF8 475 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 TMEM43Q9BTV4 400 aa15.43■□□□□ 0.06
LITAF-212ENST00000573332 DOPEY1Q5JWR5 2465 aa15.42■□□□□ 0.06
LITAF-212ENST00000573332 IGKV1D-42A0A075B6H8 117 aa15.42■□□□□ 0.06
LITAF-212ENST00000573332 A0A1W2PNV4 684 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms