RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TNFRSF1BP20333 461 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 SFTPDP35247 375 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 CPOXP36551 454 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 TPD52P55327 224 aaPredicted RBP11.95□□□□□ -0.5
CCDC40-205ENST00000571028 GFRA1P56159 465 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 RGS8P57771 180 aaPredicted RBP11.95□□□□□ -0.5
CCDC40-205ENST00000571028 COPZ1P61923 177 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 POU4F3Q15319 338 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 GLYR1Q49A26 553 aaPredicted RBP11.95□□□□□ -0.5
CCDC40-205ENST00000571028 CYBRD1Q53TN4 286 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
CCDC40-205ENST00000571028 GLYATQ6IB77 296 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 PPP4R4Q6NUP7 873 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 CCDC80Q76M96 950 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 FAM71CQ8NEG0 241 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 GPR32P1Q8NGA4 272 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 TMEM234Q8WY98 164 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 PROX1Q92786 737 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 Q96MF0 132 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 WFDC6Q9BQY6 131 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 THTPAQ9BU02 230 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 EXOSC3Q9NQT5 275 aaKnown RBP11.95□□□□□ -0.5
CCDC40-205ENST00000571028 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 RPS6KB2Q9UBS0 482 aa11.95□□□□□ -0.5
CCDC40-205ENST00000571028 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
CCDC40-205ENST00000571028 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
CCDC40-205ENST00000571028 COL6A5A8TX70 2615 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 RNF212BA8MTL3 300 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 DNAJA2O60884 412 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 SERPINA1P01009 418 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 TFPIP10646 304 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 GGT1P19440 569 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CD247P20963 164 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 ME2P23368 584 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CHMP24386 653 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 TACR3P29371 465 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
CCDC40-205ENST00000571028 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
CCDC40-205ENST00000571028 KCNJ5P48544 419 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CRYBA2P53672 197 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 NCALDP61601 193 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CEACAM7Q14002 265 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 ZSWIM7Q19AV6 140 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 FBXL19-AS1Q494R0 122 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 PLXDC2Q6UX71 529 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 PLEKHM3Q6ZWE6 761 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 FKBP9P1Q75LS8 142 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CHMP1BQ7LBR1 199 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 LACC1Q8IV20 430 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CIARTQ8N365 385 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-205ENST00000571028 GTPBP8Q8N3Z3 284 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-205ENST00000571028 MEIOBQ8N635 442 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 OR52E4Q8NGH9 312 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 LINC01560Q8TB33 94 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 WDYHV1Q96HA8 205 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 CLPTM1LQ96KA5 538 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 TRIB1Q96RU8 372 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 ACER3Q9NUN7 267 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 ADPRHL2Q9NX46 363 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 SH3GLB1Q9Y371 365 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 V9GYQ6 96 aa11.94□□□□□ -0.5
CCDC40-205ENST00000571028 EEF1E1-BLOC1S5C9J1V9 151 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 EIF1AYO14602 144 aaKnown RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 EEF1E1O43324 174 aaKnown RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 EFNA2O43921 213 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 FESP07332 822 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 ZNF17P17021 662 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 SHC1P29353 583 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 OR1E2P47887 323 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 LHX2P50458 406 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 SUCLG1P53597 346 aaKnown RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 CLDN20P56880 219 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 BNIP1Q12981 228 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 TMEM44Q2T9K0 475 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 TMEM176BQ3YBM2 270 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 NHSL2Q5HYW2 709 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 DEF8Q6ZN54 512 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 RBM45Q8IUH3 476 aaKnown RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 GRAMD2AQ8IUY3 354 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 LRRC75A-AS1Q8N1F1 130 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 BHLHE22Q8NFJ8 381 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 ST8SIA1Q92185 356 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 MRGPRX4Q96LA9 322 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 MCHR1Q99705 422 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 SERINC1Q9NRX5 453 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-205ENST00000571028 CD300AQ9UGN4 299 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
CCDC40-205ENST00000571028 FBN1P35555 2871 aaKnown RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 TMED7-TICAM2A0A0A6YYA0 188 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 CPSF4LA6NMK7 179 aaKnown RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 KDM4EB2RXH2 506 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 TNFSF11O14788 317 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 LGI1O95970 557 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 IL2RAP01589 272 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 HSD17B1P14061 328 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms