RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ATP5J2P56134 94 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MLF1P58340 268 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 FAM3BP58499 235 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 RAB10P61026 200 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ERVS71-1P61550 626 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SIRPAP78324 504 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 HSD11B2P80365 405 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SORDQ00796 357 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ID3Q02535 119 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 EGR4Q05215 589 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 RAD51Q06609 339 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CD69Q07108 199 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 BCL2L1Q07817 233 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 DMWDQ09019 674 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 HSPB3Q12988 150 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SERTAD2Q14140 314 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 KEAP1Q14145 624 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GRM7Q14831 915 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 OR4D1Q15615 310 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 LTB4RQ15722 352 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TOMM34Q15785 309 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 NPTX1Q15818 432 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 RNF151Q2KHN1 245 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MST1LQ2TV78 715 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 BSXQ3C1V8 233 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 FAM174BQ3ZCQ3 159 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CARD16Q5EG05 197 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PIGGQ5H8A4 983 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MTX3Q5HYI7 312 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TECRLQ5HYJ1 363 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ZNF648Q5T619 568 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3GQ6DHY5 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3CQ6IPX1 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ANKRD54Q6NXT1 300 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 FAM159AQ6UWV7 190 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TMEM108Q6UXF1 575 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 Q6ZVL8 140 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SEM1Q6ZVN7 128 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 DOK3Q7L591 496 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SLC16A9Q7RTY1 509 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GPR141Q7Z602 305 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MYPOPQ86VE0 399 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 CACUL1Q86Y37 369 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 KLBQ86Z14 1044 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CRLF3Q8IUI8 442 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3Q8IZP1 549 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 C1orf87Q8N0U7 546 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PELI3Q8N2H9 469 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PQLC1Q8N2U9 271 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 FBXO39Q8N4B4 442 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 KIF2BQ8N4N8 673 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 C11orf44Q8N8P7 122 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SYT14Q8NB59 555 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SIDT2Q8NBJ9 832 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 GPR26Q8NDV2 337 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 BHLHE22Q8NFJ8 381 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 OR2AP1Q8NGE2 309 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 OR2A12Q8NGT7 310 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 OR4L1Q8NH43 312 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MBD3L2Q8NHZ7 208 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 PROKR1Q8TCW9 393 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MAPK15Q8TD08 544 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 NETO1Q8TDF5 533 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 C22orf15Q8WYQ4 148 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ST8SIA2Q92186 375 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SMPDL3AQ92484 453 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 NRGNQ92686 78 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 DAZLQ92904 295 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 FGF13Q92913 245 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GLYATL1Q969I3 302 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PINX1Q96BK5 328 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 TM4SF19Q96DZ7 209 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MARS2Q96GW9 593 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 AKR1E2Q96JD6 320 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SLC45A3Q96JT2 553 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 HRASLS5Q96KN8 279 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 RILPQ96NA2 401 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 KLHL32Q96NJ5 620 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TSSK3Q96PN8 268 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PPP1R2P1Q96PQ5 205 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ACOX2Q99424 681 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GPR21Q99679 349 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ZNF559Q9BR84 538 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SEC22CQ9BRL7 303 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ATG101Q9BSB4 218 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ZNF2Q9BSG1 426 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 DCUN1D5Q9BTE7 237 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ZNF717Q9BY31 904 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 FOXQ1Q9C009 403 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CIPCQ9C0C6 399 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 YIPF3Q9GZM5 350 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 POMKQ9H5K3 350 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 WDR55Q9H6Y2 383 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 WDR54Q9H977 334 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SFXN1Q9H9B4 322 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PLGRKTQ9HBL7 147 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 NMRAL1Q9HBL8 299 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MOV10Q9HCE1 1003 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 SLC6A20Q9NP91 592 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ZC4H2Q9NQZ6 224 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms