RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PRR23D2P0DMB1 279 aaPredicted RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 COX6A1P12074 109 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 ENDOUP21128 410 aaKnown RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 PAICSP22234 425 aaKnown RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 SLC15A1P46059 708 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 VBP1P61758 197 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 EFNB1P98172 346 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 TRIP6Q15654 476 aaKnown RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 KLHL22Q53GT1 634 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 UBE2UQ5VVX9 321 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 IL20RBQ6UXL0 311 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 LNX2Q8N448 690 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 FAM98AQ8NCA5 519 aaKnown RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 ATP6V1C2Q8NEY4 427 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 OR4F15Q8NGB8 312 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 OR51G2Q8NGK0 314 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 OR52I1Q8NGK6 324 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 OR4K13Q8NH42 304 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 OR8K3Q8NH51 312 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 OIT3Q8WWZ8 545 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 RPL3LQ92901 407 aaKnown RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 SLC25A36Q96CQ1 311 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 KTI12Q96EK9 354 aaPredicted RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 MOGAT1Q96PD6 335 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 RASL10BQ96S79 203 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 MGLLQ99685 303 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 TAPBPLQ9BX59 468 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 TAS2R10Q9NYW0 307 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 PPIEQ9UNP9 301 aaKnown RBP6.44□□□□□ -1.38
SMG1-215ENST00000568239 ADAM18Q9Y3Q7 739 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 IER3IP1Q9Y5U9 82 aa6.44□□□□□ -1.38
SMG1-215ENST00000568239 CACNA1CQ13936 2221 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 C9orf172C9J069 976 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 MCIDASD6RGH6 385 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ZNF701M0R085 212 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 WISP1O95388 367 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 RAB36O95755 333 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 HIST1H2ABP04908 130 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 PIPP12273 146 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 ZNF3P17036 446 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 SOX3P41225 446 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 CLK1P49759 484 aaKnown RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 RPS15P62841 145 aaKnown RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 C17orf67Q0P5P2 114 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 CRMP1Q14194 572 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 PRAMEF20Q5VT98 475 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 NXNL2Q5VZ03 156 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ZNF517Q6ZMY9 492 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 HIST3H2AQ7L7L0 130 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 MRGPREQ86SM8 312 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 LHFPL3Q86UP9 236 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ANKRD13BQ86YJ7 626 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 SDR9C7Q8NEX9 313 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 OR11G2Q8NGC1 345 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 OR52E2Q8NGJ4 325 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 C9orf43Q8TAL5 461 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 HIST1H2ACQ93077 130 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 LGALS12Q96DT0 336 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 CRELD1Q96HD1 420 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 CDCA4Q9BXL8 241 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 MED17Q9NVC6 651 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 FOXJ2Q9P0K8 574 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 PPP4R1LQ9P1A2 415 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ENPP5Q9UJA9 477 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 TCFL5Q9UL49 500 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ZNF337Q9Y3M9 751 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ASPMQ8IZT6 3477 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 LOC102723996A0A087X1L8 192 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 KDM4EB2RXH2 506 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 M0R082 166 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 FOXD2O60548 495 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 OR7A10O76100 309 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 NADKO95544 446 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 F13BP05160 661 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 CLUP10909 449 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 PEPDP12955 493 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 HK1P19367 917 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 AHCYP23526 432 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 AQP2P41181 271 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ERVK-25P63136 954 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 PSPHP78330 225 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 EGR4Q05215 589 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 RAB40BQ12829 278 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 NFATC3Q12968 1075 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 LSAMPQ13449 338 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 C1DQ13901 141 aaKnown RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 SPHARQ15513 63 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 INPP5JQ15735 1006 aaPredicted RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 EXT1Q16394 746 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 TSTQ16762 297 aaKnown RBP6.43□□□□□ -1.38
SMG1-215ENST00000568239 SLC25A30Q5SVS4 291 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 AADACL4Q5VUY2 407 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 C1QL3Q5VWW1 255 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 SLC16A12Q6ZSM3 486 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 TMEM156Q8N614 296 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 DEFB124Q8NES8 71 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 OR51L1Q8NGJ5 315 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 ELP5Q8TE02 316 aa6.43□□□□□ -1.38
SMG1-215ENST00000568239 CT55Q8WUE5 264 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms