RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TBCDQ9BTW9 1192 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 C19orf24Q9BVV8 132 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 CARD6Q9BX69 1037 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 ELOVL4Q9GZR5 314 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 ATXN10Q9UBB4 475 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 EXTL2Q9UBQ6 330 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 PLEKHA6Q9Y2H5 1048 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 EXOSC1Q9Y3B2 195 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 RTL1A6NKG5 1358 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 BCORQ6W2J9 1755 aa2.69□□□□□ -1.98
HERPUD1-212ENST00000567944 MYO9BQ13459 2157 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 MROH5Q6ZUA9 1318 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ZFP92A6NM28 416 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 B4DXG7 233 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 H3BQV1 296 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 TNFSF11O14788 317 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 XPO1O14980 1071 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 MAPK13O15264 365 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ALOX15BO15296 676 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ZSCAN12O43309 604 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 RAMP1O60894 148 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 OR5F1O95221 314 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 LYPD3O95274 346 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ADCY5O95622 1261 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 KRT14P02533 472 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ALOX5P09917 674 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC35G4P0C7Q5 338 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CALM1P0DP23 149 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CALM2P0DP24 149 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CALM3P0DP25 149 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 GZMAP12544 262 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SDC1P18827 310 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 M6PRP20645 277 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 MAPK3P27361 379 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SOX6P35712 828 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ATP5OP48047 213 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 EFNA3P52797 238 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 RAB14P61106 215 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 B2MP61769 119 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 HERVK_113P63132 956 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ERVK-8P63133 956 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SRYQ05066 204 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 PUDPQ08623 228 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 RIPPLY1Q0D2K3 151 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ASPHQ12797 758 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ITGB3BPQ13352 177 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 COTL1Q14019 142 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CASP8Q14790 479 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CAMK4Q16566 473 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 DCAF4L1Q3SXM0 396 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 Q3ZCU0 254 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CEP55Q53EZ4 464 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 FAM120AOSQ5T036 256 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC39A4Q6P5W5 647 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 BTNL3Q6UXE8 466 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 STAC2Q6ZMT1 411 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 LPCAT2Q7L5N7 544 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 PARGQ86W56 976 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ERICH1Q86X53 443 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 RNF148Q8N7C7 305 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SHC3Q92529 594 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ART4Q93070 314 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC35B4Q969S0 331 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CIDECQ96AQ7 238 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 TUBGCP3Q96CW5 907 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 MRPL38Q96DV4 380 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 PHYHIPLQ96FC7 376 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 MSANTD3Q96H12 275 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 B3GALT6Q96L58 329 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 TMEM237Q96Q45 408 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 KIR2DL4Q99706 377 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ERVK-6Q9BXR3 956 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 EHD1Q9H4M9 534 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ZSCAN16Q9H4T2 348 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 C12orf10Q9HB07 376 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC38A10Q9HBR0 1119 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 LZTFL1Q9NQ48 299 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 C8orf4Q9NR00 106 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 DUS2Q9NX74 493 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ELOVL2Q9NXB9 296 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 NYAP2Q9P242 653 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 DPM3Q9P2X0 92 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 P2RX2Q9UBL9 471 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SPASTQ9UBP0 616 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 GHRLQ9UBU3 117 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CD300AQ9UGN4 299 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 APOBEC3BQ9UH17 382 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 ZNF490Q9ULM2 529 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 STK38LQ9Y2H1 464 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 AP1M2Q9Y6Q5 423 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 KIF24Q5T7B8 1368 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 KTN1Q86UP2 1357 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 PRRC2AP48634 2157 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 CENPFP49454 3210 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 UBE4BO95155 1302 aa2.68□□□□□ -1.98
HERPUD1-212ENST00000567944 SCN7AQ01118 1682 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 TONSLQ96HA7 1378 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 A0A1W2PNU3 283 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 CTAGE15A4D2H0 777 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms