RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CLEC18CQ8NCF0 446 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 OR10Q1Q8NGQ4 319 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 MCUR1Q96AQ8 359 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ZNF524Q96C55 264 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ASB9Q96DX5 294 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 EPYCQ99645 322 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 TAPBPLQ9BX59 468 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 TRIM15Q9C019 465 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 COQ10BQ9H8M1 238 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 DCAF13Q9NV06 445 aaKnown RBP10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ACTR3BQ9P1U1 418 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 GMPR2Q9P2T1 348 aaKnown RBP10.93□□□□□ -0.66
SF3B3-208ENST00000567250 PACSIN3Q9UKS6 424 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 FASNP49327 2511 aaKnown RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TRAPPC13A5PLN9 417 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TMEM229AB2RXF0 380 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 H0YC42 278 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 SULT2B1O00204 365 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 EBAG9O00559 213 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 DVL2O14641 736 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 EFNA2O43921 213 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 ZG16O60844 167 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 DNAJC8O75937 253 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 PLGP00747 810 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 GPIP06744 558 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 THRBP10828 461 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 CCNA2P20248 432 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 GTF2E2P29084 291 aaKnown RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 SHC1P29353 583 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 IDUAP35475 653 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 DIO1P49895 249 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TPD52P55327 224 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TAS2R41P59536 307 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 ADORA2A-AS1P86434 159 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 PMPCAQ10713 525 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 MYBPHQ13203 477 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 NPTX1Q15818 432 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 EEF1A1P5Q5VTE0 462 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 GTF2IRD2BQ6EKJ0 949 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 MYO7BQ6PIF6 2116 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TMPPEQ6ZT21 453 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 CCDC121Q6ZUS5 278 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 MRGPRGQ86SM5 289 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 GTF2IRD2Q86UP8 949 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 CYP4Z1Q86W10 505 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 MCEMP1Q8IX19 187 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 FNDC9Q8TBE3 224 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 STK35Q8TDR2 534 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 ADAMTS16Q8TE57 1224 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 CA5BP1Q8WTZ4 195 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 SLC38A4Q969I6 547 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 ZNF845Q96IR2 970 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 MPP4Q96JB8 637 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 PRRC1Q96M27 445 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TACO1Q9BSH4 297 aaKnown RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 THTPAQ9BU02 230 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 RSPO3Q9BXY4 272 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 POTEKPQ9BYX7 375 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 GLRX2Q9NS18 164 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 TRAPPC4Q9Y296 219 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 LRRK2Q5S007 2527 aa10.92□□□□□ -0.66
SF3B3-208ENST00000567250 DIDO1Q9BTC0 2240 aaKnown RBP10.92□□□□□ -0.66
SF3B3-208ENST00000567250 USP9XQ93008 2570 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 DOPEY1Q5JWR5 2465 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 A0A1W2PNR3 127 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OR2T1O43869 369 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 EIF1BO60739 113 aaKnown RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 PDE5AO76074 875 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 RCBTB2O95199 551 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OR5F1O95221 314 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OPN1LWP04000 364 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 CRHP06850 196 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 TMIGD3P0DMS9 266 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 ITGA2P17301 1181 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 TNFRSF1BP20333 461 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 ENPP1P22413 925 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 CEACAM8P31997 349 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OPRM1P35372 400 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OR1E2P47887 323 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 SLC35A1P78382 337 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 TRIM25Q14258 630 aaKnown RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 RNPS1Q15287 305 aaKnown RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 C1orf140Q5VVS0 124 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 LCN8Q6JVE9 175 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 VTCN1Q7Z7D3 282 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 DHFR2Q86XF0 187 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 SLC43A2Q8N370 569 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 C9orf106Q8NAJ2 232 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OR4D11Q8NGI4 311 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OSTF1Q92882 214 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 SDCCAG3Q96C92 435 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 CCDC124Q96CT7 223 aaKnown RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 SLC7A6OSQ96CW6 309 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 TMEM43Q9BTV4 400 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 SFXN3Q9BWM7 321 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 OR11A1Q9GZK7 315 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 MMADHCQ9H3L0 296 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 RNF122Q9H9V4 155 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms