RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	NME5	P56597	212 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	MAGOH	P61326	146 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	FGFBP1	Q14512	234 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNHIT3	Q15649	155 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	SYPL1	Q16563	259 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	C21orf62-AS1	Q17RA5	79 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ARHGAP11B	Q3KRB8	267 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	GLYR1	Q49A26	553 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ABLIM2	Q6H8Q1	611 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	AAGAB	Q6PD74	315 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	STAC2	Q6ZMT1	411 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	NUFIP2	Q7Z417	695 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	FUNDC1	Q8IVP5	155 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	LRRC34	Q8IZ02	419 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	GABRG1	Q8N1C3	465 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ANKFN1	Q8N957	763 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF610	Q8N9Z0	462 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	CEP70	Q8NHQ1	597 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	B4GALNT2	Q8NHY0	566 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	MGARP	Q8TDB4	240 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ACTRT2	Q8TDY3	377 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	FAM222B	Q8WU58	562 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ROBO4	Q8WZ75	1007 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF75CP	Q92670	426 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	NEURL3	Q96EH8	262 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	AURKB	Q96GD4	344 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	WFIKKN1	Q96NZ8	548 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	EBF4	Q9BQW3	602 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	NMUR2	Q9GZQ4	415 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	IKZF5	Q9H5V7	419 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	C3orf14	Q9HBI5	128 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	KLHL28	Q9NXS3	571 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	C6orf203	Q9P0P8	240 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ITGB1BP2	Q9UKP3	347 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	MKLN1	Q9UL63	735 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	SNX8	Q9Y5X2	465 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	AP4B1	Q9Y6B7	739 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	FBN1	P35555	2871 aa	Known RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376		A0A087WZY1	265 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	TCRBV5S2	A0A599	114 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	SERINC4	A6NH21	518 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF716	A6NP11	495 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	HDAC3	O15379	428 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	PLAU	P00749	431 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	CRH	P06850	196 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	MYZAP	P0CAP1	466 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	LBP	P18428	481 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	MATN1	P21941	496 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ENPP1	P22413	925 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	CRYGS	P22914	178 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ELK4	P28324	431 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	LCN1	P31025	176 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	SFTPD	P35247	375 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	UGT2B10	P36537	528 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	CD79B	P40259	229 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	P2RX1	P51575	399 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ART1	P52961	327 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	PSMD4	P55036	377 aa	Known RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	FOXG1	P55316	489 aa	Predicted RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	SUMO3	P55854	103 aa	Predicted RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	FOXD4	Q12950	439 aa	Predicted RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	STX3	Q13277	289 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	QPRT	Q15274	297 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	TSC22D1	Q15714	1073 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	GPR68	Q15743	365 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	PGS1	Q32NB8	556 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	VPS26B	Q4G0F5	336 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	TFAP2E	Q6VUC0	442 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	RNF130	Q86XS8	419 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	CNEP1R1	Q8N9A8	125 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	WFDC11	Q8NEX6	87 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	OR4A15	Q8NGL6	344 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	OR2V1	Q8NHB1	315 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	PNPT1	Q8TCS8	783 aa	Known RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ZFP90	Q8TF47	636 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	CNOT9	Q92600	299 aa	Known RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ZBTB8A	Q96BR9	441 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ROPN1L	Q96C74	230 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	DNAJA3	Q96EY1	480 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ARL5B	Q96KC2	179 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	KLHL15	Q96M94	604 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF300	Q96RE9	604 aa	Predicted RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	FOXC2	Q99958	501 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	PSD2	Q9BQI7	771 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	WFDC6	Q9BQY6	131 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	CCDC106	Q9BWC9	280 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	POLDIP3	Q9BY77	421 aa	Known RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	DPY30	Q9C005	99 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	PAIP1	Q9H074	479 aa	Known RBP	5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF385D	Q9H6B1	395 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	SLC25A37	Q9NYZ2	338 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	FBLN5	Q9UBX5	448 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	BTNL2	Q9UIR0	455 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	DTNA	Q9Y4J8	743 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	ANK2	Q01484	3957 aa		5.73	□□□□□ -1.49
TCF4-233	ENST00000566376	JMJD1C	Q15652	2540 aa		5.72	□□□□□ -1.49
TCF4-233	ENST00000566376	PRSS51	A0A1B0GVH4	220 aa		5.72	□□□□□ -1.49
TCF4-233	ENST00000566376	TUBAL3	A6NHL2	446 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms