RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 IL17RCQ8NAC3 791 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 OR2T12Q8NG77 320 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 OR5D14Q8NGL3 314 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SMPDL3AQ92484 453 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RPUSD4Q96CM3 377 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 MRPS24Q96EL2 167 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 FGF22Q9HCT0 170 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DHCR7Q9UBM7 475 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 FOXJ3Q9UPW0 622 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GPC6Q9Y625 555 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 RP2O75695 350 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MT-ATP6P00846 226 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SERPINE2P07093 398 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 C21orf33P30042 268 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 ASCL1P50553 236 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 NR0B1P51843 470 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 MAZP56270 477 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 RAE1P78406 368 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 MRPS21P82921 87 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 PMS2P3Q13401 168 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GPR157Q5UAW9 335 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 C3orf33Q6P1S2 294 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 LILRA6Q6PI73 481 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TECPR1Q7Z6L1 1165 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SLC15A4Q8N697 577 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 BOLLQ8N9W6 283 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 OR4N2Q8NGD1 307 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SLC13A3Q8WWT9 602 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SCRN2Q96FV2 425 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ADAD1Q96M93 576 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 NIPSNAP1Q9BPW8 284 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 AGPAT4Q9NRZ5 378 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF639Q9UID6 485 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CD207Q9UJ71 328 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF175Q9Y473 711 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 WDR45Q9Y484 360 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GPR45Q9Y5Y3 372 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 C17orf112F2Z3M2 114 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FOSL1P15407 271 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RHCEP18577 417 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SDC1P18827 310 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TEAD1P28347 426 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DHODHQ02127 395 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 BNIP3Q12983 259 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RUNX3Q13761 415 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF77Q15935 545 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 KIAA1614Q5VZ46 1190 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 PGBD2Q6P3X8 592 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RNF130Q86XS8 419 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CLVS1Q8IUQ0 354 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 CDH26Q8IXH8 852 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GATA6Q92908 595 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ASB16Q96NS5 453 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RSPH9Q9H1X1 276 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 MED20Q9H944 212 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TPT1P8Q9HAU6 139 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MCCC2Q9HCC0 563 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 PRSS16Q9NQE7 514 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MYEF2Q9P2K5 600 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 XKRY2A2RUG3 117 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 C3orf80F5H4A9 247 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GTF2F2P13984 249 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF182P17025 639 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 VEGFCP49767 419 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 PGDP52209 483 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RHAGQ02094 409 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DNASE1L3Q13609 305 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 EXOSC7Q15024 291 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 ITPRIPL2Q3MIP1 535 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TMEM268Q5VZI3 342 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DPY19L2P2Q6ZN68 376 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TIFABQ6ZNK6 161 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DGAT2L6Q6ZPD8 337 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 C17orf107Q6ZR85 190 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 HTR3DQ70Z44 454 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 KLHL36Q8N4N3 616 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 THAP6Q8TBB0 222 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZCCHC14Q8WYQ9 949 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 HOXB13Q92826 284 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 DPH1Q9BZG8 443 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SLC25A31Q9H0C2 315 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SAP130Q9H0E3 1048 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 P2RY12Q9H244 342 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MEAF6Q9HAF1 191 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 POT1Q9NUX5 634 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FKBP11Q9NYL4 201 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 R4GN57 208 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 NIPBLQ6KC79 2804 aaeCLIP3.12□□□□□ -1.911e-5■□□□□ 11.1
CHD9-213ENST00000564845 PMS2P1A4D2B8 440 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 KHNYNO15037 678 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 HCRTR2O43614 444 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ADAP00813 363 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FHP07954 510 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 HBG1P69891 147 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 HBG2P69892 147 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SYPL1Q16563 259 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SPIN3Q5JUX0 258 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 AKAP14Q86UN6 197 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FAM46DQ8NEK8 389 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SIGLEC11Q96RL6 698 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms