RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FBXW5Q969U6 566 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 CCDC106Q9BWC9 280 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 POTEKPQ9BYX7 375 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 MTHFD2LQ9H903 347 aaPredicted RBP16.37■□□□□ 0.21
CLN6-204ENST00000564752 CTPS2Q9NRF8 586 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 CALML5Q9NZT1 146 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 CHRNA9Q9UGM1 479 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 FREM1Q5H8C1 2179 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 TMEM247A6NEH6 219 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 ZNF724A8MTY0 619 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 INAFM1C9JVW0 142 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 NR5A2O00482 541 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 SMAD9O15198 467 aaKnown RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 TFPIP10646 304 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 UQCRBP14927 111 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 IDH2P48735 452 aaKnown RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 CRISP3P54108 245 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 CSNK2A1P68400 391 aaPredicted RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 TNK1Q13470 666 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 ZNF672Q499Z4 452 aaPredicted RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 MRPL2Q5T653 305 aaKnown RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 ATG4DQ86TL0 474 aaPredicted RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 SMAP2Q8WU79 429 aaPredicted RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 GTF2H4Q92759 462 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 NEUROG1Q92886 237 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 ZNF775Q96BV0 537 aaPredicted RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 CACYBPQ9HB71 228 aaKnown RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
CLN6-204ENST00000564752 PRSS50Q9UI38 385 aa16.36■□□□□ 0.21
CLN6-204ENST00000564752 DPRXA6NFQ7 191 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 SULT2B1O00204 365 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 AP3D1O14617 1153 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 ADAM11O75078 769 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 FESP07332 822 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 EDNRAP25101 427 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 DIO1P49895 249 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 PPP2R2BQ00005 443 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 LIN52Q52LA3 116 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 TMPPEQ6ZT21 453 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 CKAP2Q8WWK9 683 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 TRMT61AQ96FX7 289 aaKnown RBP16.35■□□□□ 0.21
CLN6-204ENST00000564752 MAGEB18Q96M61 343 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 ZNF300Q96RE9 604 aaPredicted RBP16.35■□□□□ 0.21
CLN6-204ENST00000564752 PAIP1Q9H074 479 aaKnown RBP16.35■□□□□ 0.21
CLN6-204ENST00000564752 RAD21L1Q9H4I0 556 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 PCDHB14Q9Y5E9 798 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 DSPPQ9NZW4 1301 aa16.35■□□□□ 0.21
CLN6-204ENST00000564752 A0A096LPI6 279 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 KIAA1324LA8MWY0 1029 aaPredicted RBP16.34■□□□□ 0.21
CLN6-204ENST00000564752 LYZL6O75951 148 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 HTR3AP46098 478 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 BSPH1Q075Z2 132 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 MAPK11Q15759 364 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 CLEC12BQ2HXU8 276 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 RPS26P11Q5JNZ5 115 aaPredicted RBP16.34■□□□□ 0.21
CLN6-204ENST00000564752 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 ZNF836Q6ZNA1 936 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 GALNT5Q7Z7M9 940 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 ZNF440Q8IYI8 595 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 OR52P1PQ8NH57 321 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 SLC38A5Q8WUX1 472 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 ZHX1-C8orf76Q96EF9 292 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 TMEM19Q96HH6 336 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 TRIM2Q9C040 744 aa16.34■□□□□ 0.21
CLN6-204ENST00000564752 CADP27708 2225 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 CLIC1O00299 241 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 FAAHO00519 579 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 TFPTP0C1Z6 253 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 CCNA2P20248 432 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 FKBP2P26885 142 aaKnown RBP16.33■□□□□ 0.2
CLN6-204ENST00000564752 IDUAP35475 653 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 POLR2HP52434 150 aaKnown RBP16.33■□□□□ 0.2
CLN6-204ENST00000564752 IRX1P78414 480 aaPredicted RBP16.33■□□□□ 0.2
CLN6-204ENST00000564752 EPS8Q12929 822 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 FADDQ13158 208 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 SQLEQ14534 574 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 PDK3Q15120 406 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 PPA1Q15181 289 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 RGNQ15493 299 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 ETFDHQ16134 617 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 PGGHGQ32M88 737 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 MTDHQ86UE4 582 aaKnown RBP16.33■□□□□ 0.2
CLN6-204ENST00000564752 VRK2Q86Y07 508 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 FUNDC1Q8IVP5 155 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 KBTBD8Q8NFY9 601 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 MDFIQ99750 246 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 OR11A1Q9GZK7 315 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 RLIMQ9NVW2 624 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 ZNF443Q9Y2A4 671 aaPredicted RBP16.33■□□□□ 0.2
CLN6-204ENST00000564752 HDGFL3Q9Y3E1 203 aa16.33■□□□□ 0.2
CLN6-204ENST00000564752 MAGED1Q9Y5V3 778 aaPredicted RBP16.33■□□□□ 0.2
CLN6-204ENST00000564752 IGKV3D-15A0A087WSY6 115 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 TMED7-TICAM2A0A0A6YYA0 188 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 CDHR4A6H8M9 788 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 SASH3O75995 380 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 PGM3O95394 542 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 PMS2P2O95744 297 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms