RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 BADQ92934 168 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 TGM7Q96PF1 710 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 MCHR1Q99705 422 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 MAPKAP1Q9BPZ7 522 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 TUBGCP2Q9BSJ2 902 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 SPATA16Q9BXB7 569 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 ZNF385DQ9H6B1 395 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 ZNF702PQ9H963 129 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 RAB18Q9NP72 206 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 PCSK1NQ9UHG2 260 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 DDX19BQ9UMR2 479 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 SCML2Q9UQR0 700 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 CA5BQ9Y2D0 317 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 KDRP35968 1356 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 NRKQ7Z2Y5 1582 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 DLG5Q8TDM6 1919 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 FAM135BQ49AJ0 1406 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 EDC4Q6P2E9 1401 aaKnown RBP3.43□□□□□ -1.86
LINC00560-201ENST00000564593 PPIP5K1Q6PFW1 1433 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 LRRC7Q96NW7 1537 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 E7ESA3 106 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 KIF2AO00139 706 aaPredicted RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PRRG1O14668 218 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 RS1O15537 224 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 TBL1XO60907 577 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 OR8U8P0C7N1 319 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 IGLL1P15814 213 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 HOXD10P28358 340 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 LAP3P28838 519 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 NMT1P30419 496 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 DEKP35659 375 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 P2RY1P47900 373 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SLC10A7Q0GE19 358 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 AANATQ16613 207 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 TP53I3Q53FA7 332 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 ATP6V0D2Q8N8Y2 350 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 FBXO30Q8TB52 745 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 TCTEX1D2Q8WW35 142 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SLC5A11Q8WWX8 675 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 EMG1Q92979 244 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 FGGYQ96C11 551 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 NAT10Q9H0A0 1025 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SLITRK2Q9H156 845 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 RHBGQ9H310 441 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SMPD3Q9NY59 655 aaPredicted RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 B3GNT2Q9NY97 397 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SIGLEC8Q9NYZ4 499 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 C6orf203Q9P0P8 240 aaPredicted RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PIPOXQ9P0Z9 390 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 WARS2Q9UGM6 360 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 TBK1Q9UHD2 729 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PLLPQ9Y342 182 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 A0A1W2PP64 1363 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 NALCNQ8IZF0 1738 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 C3P01024 1663 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 TOPAZ1Q8N9V7 1692 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 LRP5LA4QPB2 252 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PRKYO43930 277 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 HCN1O60741 890 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 GNA14O95837 355 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PNMTP11086 282 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 ZNF44P15621 663 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SLC26A2P50443 739 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PRKXP51817 358 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 HSPA2P54652 639 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 ACTR1AP61163 376 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 MAP2K1Q02750 393 aaPredicted RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 GPM6BQ13491 265 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 GANABQ14697 944 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 LRRC36Q1X8D7 754 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SPATA46Q5T0L3 261 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 CCDC137Q6PK04 289 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 CASC1Q6TDU7 716 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 TFAP2EQ6VUC0 442 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SYT10Q6XYQ8 523 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 CCDC80Q76M96 950 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 C17orf82Q86X59 251 aaPredicted RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SPAG16Q8N0X2 631 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 CLEC4FQ8N1N0 589 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 FAM133AQ8N9E0 248 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 OR10H4Q8NGA5 316 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 SMYD3Q9H7B4 428 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 PTBP2Q9UKA9 531 aaKnown RBP3.42□□□□□ -1.86
LINC00560-201ENST00000564593 RASD1Q9Y272 281 aa3.42□□□□□ -1.86
LINC00560-201ENST00000564593 N4BP2Q86UW6 1770 aaPredicted RBP3.41□□□□□ -1.86
LINC00560-201ENST00000564593 TP53BP1Q12888 1972 aaPredicted RBP3.41□□□□□ -1.86
LINC00560-201ENST00000564593 TECPR2O15040 1411 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 PTCH1Q13635 1447 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 UBR1Q8IWV7 1749 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 KIF13AQ9H1H9 1805 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 A0A1B0GWB2 263 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 TAPBPO15533 448 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 SNNO75324 88 aaPredicted RBP3.41□□□□□ -1.86
LINC00560-201ENST00000564593 LYPLA1O75608 230 aaPredicted RBP3.41□□□□□ -1.86
LINC00560-201ENST00000564593 IGHV3-23P01764 117 aa3.41□□□□□ -1.86
LINC00560-201ENST00000564593 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
LINC00560-201ENST00000564593 POLR2EP19388 210 aaKnown RBP3.41□□□□□ -1.86
LINC00560-201ENST00000564593 PSMB1P20618 241 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms