RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CFAP73A6NFT4 308 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 TRIM64A6NGJ6 449 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 TRIM64BA6NI03 449 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 C9JVG2 144 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 BCAS1O75363 584 aaPredicted RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 MRPL33O75394 65 aaKnown RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 SLC22A3O75751 556 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 EPHA3P29320 983 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 IL12AP29459 219 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 IDUAP35475 653 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 STK11Q15831 433 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 SYPL1Q16563 259 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 Q71RC1 249 aaPredicted RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 UBE2J2Q8N2K1 259 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 ANKFN1Q8N957 763 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 ZNF775Q96BV0 537 aaPredicted RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 MAELQ96JY0 434 aaKnown RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 INPP5KQ9BT40 448 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 WDR55Q9H6Y2 383 aaPredicted RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 RMND5AQ9H871 391 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 TAS2R16Q9NYV7 291 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 ZIM2Q9NZV7 527 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 P2RX2Q9UBL9 471 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 OSGIN1Q9UJX0 560 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 SLC9A8Q9Y2E8 581 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 TMED7Q9Y3B3 224 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 SMAD7O15105 426 aaKnown RBP13.24□□□□□ -0.29
SPG7-210ENST00000564409 CHRM4P08173 479 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 NME5P56597 212 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 OR2B6P58173 313 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 PLAURQ03405 335 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 EPS8Q12929 822 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 ADAM19Q9H013 955 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 ALG2Q9H553 416 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 ARMC7Q9H6L4 198 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 MANSC1Q9H8J5 431 aa13.24□□□□□ -0.29
SPG7-210ENST00000564409 BARX1Q9HBU1 254 aaPredicted RBP13.24□□□□□ -0.29
SPG7-210ENST00000564409 SDR39U1Q9NRG7 319 aaPredicted RBP13.24□□□□□ -0.29
SPG7-210ENST00000564409 CIB4A0PJX0 185 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 TMEM247A6NEH6 219 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 CLDN24A6NM45 220 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 KLF11O14901 512 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 ADAM11O75078 769 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 ERLIN1O75477 346 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 SOD3P08294 240 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 PTAFRP25105 342 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 TACR3P29371 465 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 CDKN2CP42773 168 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 CRISP3P54108 245 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 PPP2R2BQ00005 443 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 TGFBR3Q03167 851 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 LARS2Q15031 903 aaKnown RBP13.23□□□□□ -0.29
SPG7-210ENST00000564409 LIN52Q52LA3 116 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 MRPL2Q5T653 305 aaKnown RBP13.23□□□□□ -0.29
SPG7-210ENST00000564409 NXNQ6DKJ4 435 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 PAQR6Q6TCH4 344 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 DTX2Q86UW9 622 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 C17orf78Q8N4C9 275 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 C1orf162Q8NEQ5 155 aaPredicted RBP13.23□□□□□ -0.29
SPG7-210ENST00000564409 ITCHQ96J02 903 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 SF3B5Q9BWJ5 86 aaKnown RBP13.23□□□□□ -0.29
SPG7-210ENST00000564409 OR11A1Q9GZK7 315 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 CACYBPQ9HB71 228 aaKnown RBP13.23□□□□□ -0.29
SPG7-210ENST00000564409 CISD1Q9NZ45 108 aaKnown RBP13.23□□□□□ -0.29
SPG7-210ENST00000564409 DCTN4Q9UJW0 460 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
SPG7-210ENST00000564409 DSPPQ9NZW4 1301 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 A0A096LPI6 279 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 CDHR4A6H8M9 788 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 CCT8L1PA6NM43 557 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 SHISA9B4DS77 424 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 AP3D1O14617 1153 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 UBDO15205 165 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 ANP32DO95626 131 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 GSNP06396 782 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 GPIP06744 558 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 THBS1P07996 1170 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 PAX7P23759 505 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 CXCR1P25024 350 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 EDNRAP25101 427 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 COPZ1P61923 177 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 NRF1Q16656 503 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 CLEC12BQ2HXU8 276 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 PGGHGQ32M88 737 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 COX20Q5RI15 118 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 RNF220Q5VTB9 566 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 AGAP6Q5VW22 663 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 PRAMEF8Q5VWM4 474 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 PRAMEF7Q5VXH5 474 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 CCDC103Q8IW40 242 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 DEPDC4Q8N2C3 294 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 KBTBD8Q8NFY9 601 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 TRAF4Q9BUZ4 470 aaPredicted RBP13.22□□□□□ -0.29
SPG7-210ENST00000564409 AMBRA1Q9C0C7 1298 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms