RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 LSM3P62310 102 aaKnown RBP16.27■□□□□ 0.2
GDE1-203ENST00000564172 LARS2Q15031 903 aaKnown RBP16.27■□□□□ 0.2
GDE1-203ENST00000564172 NNATQ16517 81 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 SPANXN2Q5MJ10 180 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 FAM199XQ6PEV8 388 aaPredicted RBP16.27■□□□□ 0.2
GDE1-203ENST00000564172 RAB11FIP2Q7L804 512 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 YIPF7Q8N8F6 280 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 OR5T2Q8NGG2 359 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 OR8H1Q8NGG4 311 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 OR4D10Q8NGI6 311 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 OR4C15Q8NGM1 316 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 PHF21AQ96BD5 680 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 NUDT9Q9BW91 350 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 CACYBPQ9HB71 228 aaKnown RBP16.27■□□□□ 0.2
GDE1-203ENST00000564172 RHCGQ9UBD6 479 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 SLC13A4Q9UKG4 626 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 PCNX2A6NKB5 2137 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 EFCAB9A8MZ26 197 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 PEX12O00623 359 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 THBS1P07996 1170 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 GUSBP08236 651 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 THRBP10828 461 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 RFX2P48378 723 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 TEX261Q6UWH6 196 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 ANKRD37Q7Z713 158 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 PIP4P1Q86T03 277 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 TSPYL5Q86VY4 417 aaPredicted RBP16.27■□□□□ 0.19
GDE1-203ENST00000564172 OR1N1Q8NGS0 311 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 HYLS1Q96M11 299 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 GPR137Q96N19 417 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 ARHGDIGQ99819 225 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 TMEFF2Q9UIK5 374 aaPredicted RBP16.27■□□□□ 0.19
GDE1-203ENST00000564172 C3orf18Q9UK00 162 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 CBLCQ9ULV8 474 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 OR10H1Q9Y4A9 318 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 U3KQ87 197 aa16.27■□□□□ 0.19
GDE1-203ENST00000564172 IGHV3-20A0A0C4DH32 117 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 HS6ST1O60243 411 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 PRKNO60260 465 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 GADD45GO95257 159 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 DBIP07108 87 aaKnown RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 CHMP24386 653 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 NBL1P41271 181 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 PPICP45877 212 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 EEF1A1P68104 462 aaKnown RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 FLYWCH1Q4VC44 716 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 ANKRD39Q53RE8 183 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 DCAF12Q5T6F0 453 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 ZNF836Q6ZNA1 936 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 CYP4Z1Q86W10 505 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 RDH10Q8IZV5 341 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 MORN4Q8NDC4 146 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 METTL21AQ8WXB1 218 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 MESP1Q9BRJ9 268 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 NMNAT1Q9HAN9 279 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 KLHL28Q9NXS3 571 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 A4GNTQ9UNA3 340 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 SLC1A7O00341 560 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 GNB5O14775 395 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 FRS3O43559 492 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 SFTPCP11686 197 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 LIMS1P48059 325 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 DAPP51397 102 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 GPR143P51810 404 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 PIN1Q13526 163 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 ZNF169Q14929 603 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 TRIP6Q15654 476 aaKnown RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 EXOC3L2Q2M3D2 409 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 ZIK1Q3SY52 487 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 ZMAT1Q5H9K5 638 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 DHRS13Q6UX07 377 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 BEND4Q6ZU67 534 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 CCDC190Q86UF4 302 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 ST8SIA2Q92186 375 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 MR1Q95460 341 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 LIN37Q96GY3 246 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 ARL5BQ96KC2 179 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 NEDD4LQ96PU5 975 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 SDHCQ99643 169 aaPredicted RBP16.26■□□□□ 0.19
GDE1-203ENST00000564172 CRB3Q9BUF7 120 aa16.26■□□□□ 0.19
GDE1-203ENST00000564172 TRAV20A0A0B4J274 112 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 LINC00587B1AMM8 73 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 CSO75390 466 aaKnown RBP16.25■□□□□ 0.19
GDE1-203ENST00000564172 TGM6O95932 706 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 MT-CO3P00414 261 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 CDK1P06493 297 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 NID1P14543 1247 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 STPG1Q5TH74 334 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 KDM4DQ6B0I6 523 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 BCORP1Q8N888 145 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 RBPMSQ93062 196 aaKnown RBP16.25■□□□□ 0.19
GDE1-203ENST00000564172 ADIPOR1Q96A54 375 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 G6PC3Q9BUM1 346 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 NXF5Q9H1B4 397 aaKnown RBP16.25■□□□□ 0.19
GDE1-203ENST00000564172 WDR54Q9H977 334 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 COPS7AQ9UBW8 275 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 HSPB11Q9Y547 144 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 CIB4A0PJX0 185 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 PMS2P1A4D2B8 440 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 EFCAB10A6NFE3 127 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms