RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 C18orf21Q32NC0 220 aaPredicted RBP8.78□□□□□ -1
HDGFL3-204ENST00000563790 KRT80Q6KB66 452 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 GALNT7Q86SF2 657 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 LRP11Q86VZ4 500 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 ZNF101Q8IZC7 436 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 KRT78Q8N1N4 520 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 MYO1HQ8N1T3 1032 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 NAT8LQ8N9F0 302 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 OR4C13Q8NGP0 309 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 PPP1R35Q8TAP8 253 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 ZFP90Q8TF47 636 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 IPCEF1Q8WWN9 437 aaPredicted RBP8.78□□□□□ -1
HDGFL3-204ENST00000563790 HIST1H2AHQ96KK5 128 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 HIST1H2AJQ99878 128 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 BAG1Q99933 345 aaPredicted RBP8.78□□□□□ -1
HDGFL3-204ENST00000563790 TM2D3Q9BRN9 247 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 H2AFJQ9BTM1 129 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 MCRIP2Q9BUT9 160 aaKnown RBP8.78□□□□□ -1
HDGFL3-204ENST00000563790 TRIM15Q9C019 465 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 NOX3Q9HBY0 568 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 XAB2Q9HCS7 855 aaKnown RBP8.78□□□□□ -1
HDGFL3-204ENST00000563790 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
HDGFL3-204ENST00000563790 SLC22A14Q9Y267 594 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 CHST2Q9Y4C5 530 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 SMAD5-AS1Q9Y6J3 95 aa8.78□□□□□ -1
HDGFL3-204ENST00000563790 A0A1W2PRB8 838 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 F5H0A9 414 aaPredicted RBP8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 BANF1O75531 89 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 DEDDO75618 318 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 CELA3BP08861 270 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 ENO2P09104 434 aaPredicted RBP8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 NR2F6P10588 404 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 GDF5P43026 501 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 FOXA1P55317 472 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 CORO7P57737 925 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 ZNF763Q0D2J5 394 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 PDK3Q15120 406 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 PRICKLE4Q2TBC4 344 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 ESCO2Q56NI9 601 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 TTMPQ5BVD1 217 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 MARCH3Q86UD3 253 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 IGDCC3Q8IVU1 814 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 PALM2Q8IXS6 379 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 SPICQ8N5J4 248 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 CALML6Q8TD86 181 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 RAB40AQ8WXH6 277 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 RANBP3Q9H6Z4 567 aaPredicted RBP8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 MED17Q9NVC6 651 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 FLRT3Q9NZU0 649 aa8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 ZNF490Q9ULM2 529 aaPredicted RBP8.77□□□□□ -1.01
HDGFL3-204ENST00000563790 ARPC4-TTLL3A0A0A6YYG9 625 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 A0A0U1RQK1 487 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 A0A1W2PRX2 142 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 EFNA2O43921 213 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 MRPL33O75394 65 aaKnown RBP8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 WISP3O95389 354 aaPredicted RBP8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 CLIC3O95833 236 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 ZNF37AP17032 561 aaPredicted RBP8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 GNAZP19086 355 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 EPORP19235 508 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 PIK3R1P27986 724 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 GP5P40197 560 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 IL2P60568 153 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 GNB2P62879 340 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 CDKL1Q00532 357 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 LAPTM5Q13571 262 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 E2F2Q14209 437 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 TMEM176BQ3YBM2 270 aaPredicted RBP8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 TMEM35AQ53FP2 167 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 ABLIM2Q6H8Q1 611 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 GSTA5Q7RTV2 222 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 GAS2L3Q86XJ1 694 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 KLHL36Q8N4N3 616 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 OR52R1Q8NGF1 315 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 ACTRT2Q8TDY3 377 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 SLC9A6Q92581 669 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 NEURL3Q96EH8 262 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 BBS4Q96RK4 519 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 MS4A8Q9BY19 250 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 MAT2BQ9NZL9 334 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 EGFL7Q9UHF1 273 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 GUCA1BQ9UMX6 200 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 LRCH1Q9Y2L9 728 aa8.76□□□□□ -1.01
HDGFL3-204ENST00000563790 KIR2DS1A0A191URI9 304 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 A0A1W2PR48 441 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 ZNF716A6NP11 495 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 ANGPTL1O95841 491 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 IGHV2-70P01814 119 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 KRT14P02533 472 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 OPN1SWP03999 348 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 ZNF41P51814 821 aaPredicted RBP8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 FGF12P61328 243 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 SARNPP82979 210 aaKnown RBP8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 SLC3A1Q07837 685 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 GLIPR1L2Q4G1C9 344 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 PHYHD1Q5SRE7 291 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 TEDDM1Q5T9Z0 273 aa8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 RNASEH2BQ5TBB1 312 aaKnown RBP8.75□□□□□ -1.01
HDGFL3-204ENST00000563790 OR52E8Q6IFG1 317 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms