RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ZFAND3Q9H8U3 227 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 DYNLRB1Q9NP97 96 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 MIEF1Q9NQG6 463 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 PGPEP1Q9NXJ5 209 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 GIN1Q9NXP7 522 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 GMPR2Q9P2T1 348 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 UPB1Q9UBR1 384 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 NFU1Q9UMS0 254 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 JRKLQ9Y4A0 524 aa6.62□□□□□ -1.35
HERPUD1-206ENST00000563343 IGHV2OR16-5A0A0B4J2B6 119 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 SERTM1A2A2V5 107 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 NPIPB8E9PQR5 432 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 CLDN34H7C241 214 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF264O43296 627 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 EIF4E2O60573 245 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 HSPA4LO95757 839 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 KRT6AP02538 564 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 KRT6BP04259 564 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ALOX5P09917 674 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 SBK3P0C264 359 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 PAX7P23759 505 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 RBMXP38159 391 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ANP32AP39687 249 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 KRT6CP48668 564 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 EVX1P49640 407 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 PRKAG1P54619 331 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ATP12AP54707 1039 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 POU6F2P78424 691 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 SLC17A1Q14916 467 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 SLC9A3R2Q15599 337 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF385BQ569K4 471 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 KLF17Q5JT82 389 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 MROH9Q5TGP6 573 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 DCAF12L2Q5VW00 463 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ZCCHC12Q6PEW1 402 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 LINGO2Q7L985 606 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 BCL6BQ8N143 479 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 TMEM151AQ8N4L1 468 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ZIC4Q8N9L1 334 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 MAGEE2Q8TD90 523 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 SLC25A43Q8WUT9 341 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ST8SIA1Q92185 356 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 BCL2L2Q92843 193 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 CDS1Q92903 461 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 CIDECQ96AQ7 238 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 TMEM45BQ96B21 275 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 EGLN2Q96KS0 407 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 MS4A4EQ96PG1 132 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 KCNS3Q9BQ31 491 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 CCDC106Q9BWC9 280 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 RSPO3Q9BXY4 272 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 MRPL37Q9BZE1 423 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 TRIM31Q9BZY9 425 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF69Q9UC07 566 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 TMCO1Q9UM00 188 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 SLC9A8Q9Y2E8 581 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 DTNAQ9Y4J8 743 aa6.61□□□□□ -1.35
HERPUD1-206ENST00000563343 OR6C65A6NJZ3 312 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 A8MT66 165 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 M0R233 179 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 GTPBP1O00178 669 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 EIF3HO15372 352 aaKnown RBP eCLIP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 SYNGR3O43761 229 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ULK1O75385 1050 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 URI1O94763 535 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 LGI1O95970 557 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 IGHV2-5P01817 119 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 GSNP06396 782 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 GSTA2P09210 222 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ANPEPP15144 967 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CDH2P19022 906 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 OMGP23515 440 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 GPC1P35052 558 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 MAGEA8P43361 318 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 MAGEA12P43365 314 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 SEC24CP53992 1094 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 DR1Q01658 176 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 GUCY2DQ02846 1103 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CLCQ05315 142 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 BTKQ06187 659 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 MERTKQ12866 999 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 SKP2Q13309 424 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CBFBQ13951 182 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ATP6AP1LQ52LC2 224 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ASPHD2Q6ICH7 369 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CDC73Q6P1J9 531 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 KLC3Q6P597 504 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 TRIM46Q7Z4K8 759 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 SPC24Q8NBT2 197 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 RFWD2Q8NHY2 731 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CDC26Q8NHZ8 85 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 TMIGD2Q96BF3 282 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ZHX1-C8orf76Q96EF9 292 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF764Q96H86 408 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF385AQ96PM9 386 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF382Q96SR6 550 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 STACQ99469 402 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms