RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 VWA1Q6PCB0 445 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 RINLQ6ZS11 566 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 GRINAQ7Z429 371 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 LZICQ8WZA0 190 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 FIG4Q92562 907 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 WNT2BQ93097 391 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 TAMM41Q96BW9 452 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 UCN2Q96RP3 112 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 NPAS1Q99742 590 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 FOXC2Q99958 501 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 KLHDC3Q9BQ90 382 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 SERINC1Q9NRX5 453 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 USP22Q9UPT9 525 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 ZNF337Q9Y3M9 751 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 C2CD3Q4AC94 2353 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 GJE1A6NN92 205 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 TPST1O60507 370 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 FESP07332 822 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 GGT1P19440 569 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 CD247P20963 164 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 ME2P23368 584 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 CLDN20P56880 219 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 SELENOWP63302 87 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 BNIP2Q12982 314 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 TOMM34Q15785 309 aaPredicted RBP14.03□□□□□ -0.16
USB1-208ENST00000563207 WBP2NLQ6ICG8 309 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 RANBP3LQ86VV4 465 aaPredicted RBP14.03□□□□□ -0.16
USB1-208ENST00000563207 LSMEM1Q8N8F7 131 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 SMYD1Q8NB12 490 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 PROX1Q92786 737 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 ZNF845Q96IR2 970 aaPredicted RBP14.03□□□□□ -0.16
USB1-208ENST00000563207 TM9SF2Q99805 663 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 BTBD10Q9BSF8 475 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 TRIM2Q9C040 744 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 MUC13Q9H3R2 512 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 PLEKHF2Q9H8W4 249 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 GORASP2Q9H8Y8 452 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 ADPRHL2Q9NX46 363 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 TESQ9UGI8 421 aaKnown RBP14.03□□□□□ -0.16
USB1-208ENST00000563207 MAGEL2Q9UJ55 1249 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 FOXD3Q9UJU5 478 aaPredicted RBP14.03□□□□□ -0.16
USB1-208ENST00000563207 SLC9A8Q9Y2E8 581 aa14.03□□□□□ -0.16
USB1-208ENST00000563207 SPIN1Q9Y657 262 aaPredicted RBP14.03□□□□□ -0.16
USB1-208ENST00000563207 A0A1W2PNV4 684 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 GYG2O15488 501 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 FMO6PO60774 539 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 ADAM11O75078 769 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 OPN1SWP03999 348 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 GKN3PP0CG01 181 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 CD99P14209 185 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 CRYBA2P53672 197 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 RGS8P57771 180 aaPredicted RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 NCALDP61601 193 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 FAM27E3Q08E93 113 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 FOXF1Q12946 379 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 SELENBP1Q13228 472 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 NRF1Q16656 503 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 GLIPR1L2Q4G1C9 344 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 LRRC23Q53EV4 343 aaPredicted RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 CYBRD1Q53TN4 286 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 GLYATQ6IB77 296 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 PLEKHM3Q6ZWE6 761 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 BTLAQ7Z6A9 289 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 TGIF2LYQ8IUE0 185 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 MEIOBQ8N635 442 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 OR52E4Q8NGH9 312 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 POC1BQ8TC44 478 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 SLC25A43Q8WUT9 341 aaPredicted RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 POP5Q969H6 163 aaKnown RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 STARD4Q96DR4 205 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 LRRC46Q96FV0 321 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 ARHGDIGQ99819 225 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 SFXN3Q9BWM7 321 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 RSPO3Q9BXY4 272 aaPredicted RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 ADAM19Q9H013 955 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 GSX1Q9H4S2 264 aaPredicted RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 C12orf10Q9HB07 376 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 PAQR5Q9NXK6 330 aaPredicted RBP14.02□□□□□ -0.17
USB1-208ENST00000563207 RPS6KA6Q9UK32 745 aa14.02□□□□□ -0.17
USB1-208ENST00000563207 A8MXE2 369 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 H3BML4 177 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 EBAG9O00559 213 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 AP3D1O14617 1153 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 SIAH2O43255 324 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 SEC14L5O43304 696 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 ATE1O95260 518 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 OPN1LWP04000 364 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 HRGP04196 525 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 KLK2P20151 261 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 CLK1P49759 484 aaKnown RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 POLR2HP52434 150 aaKnown RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 RPS3AP61247 264 aaKnown RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 SIRPAP78324 504 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 MERTKQ12866 999 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 FOXD4Q12950 439 aaPredicted RBP14.01□□□□□ -0.17
USB1-208ENST00000563207 CEACAM7Q14002 265 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 PDSS1Q5T2R2 415 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 FBXW10Q5XX13 1052 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 C3orf33Q6P1S2 294 aa14.01□□□□□ -0.17
USB1-208ENST00000563207 C22orf34Q6ZV56 151 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms