RNA–Protein interactions for RNA: ENST00000563201.1

TNRC6A-210, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 276 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-210ENST00000563201 ZNF302Q9NR11 478 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 RBM28Q9NW13 759 aaKnown RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 DUS2Q9NX74 493 aaKnown RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 VNN3Q9NY84 501 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 TECRQ9NZ01 308 aaKnown RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 LHX3Q9UBR4 397 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 RSPH14Q9UHP6 348 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 BCAP29Q9UHQ4 241 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 ZNF490Q9ULM2 529 aaPredicted RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 DIMT1Q9UNQ2 313 aaKnown RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 NTNG1Q9Y2I2 539 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 RPH3AQ9Y2J0 694 aaPredicted RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 KIF25-AS1Q9Y6Z4 181 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 COL7A1Q02388 2944 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 RAI1Q7Z5J4 1906 aaPredicted RBP1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 MED12Q93074 2177 aa1.3□□□□□ -2.2
TNRC6A-210ENST00000563201 PCLOQ9Y6V0 5065 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 TRAV9-2A0A087WT02 112 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 TMEM150BA6NC51 233 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 MFSD2BA6NFX1 497 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 FAM47DPA6NHR8 397 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 TRIM49D1C9J1S8 452 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 D6RAR5 112 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 H0Y9J4 135 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 H3BTX0 84 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CASC3O15234 703 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PHF1O43189 567 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 SLC7A4O43246 635 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CHMP2AO43633 222 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 DFNA5O60443 496 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 SERF1AO75920 110 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ECDO95905 644 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CHRNGP07510 517 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CCDC159P0C7I6 412 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ALPPL2P10696 532 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 EZRP15311 586 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ATF6P18850 670 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ZP3P21754 424 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 HTR1EP28566 365 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 UGT1A5P35504 534 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 MTIF2P46199 727 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 NT5C2P49902 561 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 IST1P53990 364 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 WNT4P56705 351 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 HERV-K104P63124 156 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 DEFA6Q01524 100 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 EIF3IQ13347 325 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 KLF5Q13887 457 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CD226Q15762 336 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CAMK4Q16566 473 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CARTPTQ16568 116 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CDKN3Q16667 212 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PARP6Q2NL67 630 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 UNC50Q53HI1 259 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 IL23RQ5VWK5 629 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PRAMEF8Q5VWM4 474 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 SLC8B1Q6J4K2 584 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 STEAP1BQ6NZ63 245 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 GUSBP11Q6P575 273 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 TMEM270Q6UE05 265 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 DLEU7Q6UYE1 221 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 TFAP2EQ6VUC0 442 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 DPY19L2P2Q6ZN68 376 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 GCNT7Q6ZNI0 430 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 C16orf47Q6ZP98 133 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 LRRC70Q7Z2Q7 622 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 EFL1Q7Z2Z2 1120 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 GPBP1Q86WP2 473 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CDR2LQ86X02 465 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CCDC170Q8IYT3 715 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 FBXL16Q8N461 479 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 RTL3Q8N8U3 475 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ZNRF1Q8ND25 227 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 KLHL30-AS1Q8NEE0 82 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 WFDC11Q8NEX6 87 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 OR6T1Q8NGN1 323 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 OR4F5Q8NH21 305 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 OR4C6Q8NH72 309 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ZNF461Q8TAF7 563 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 SCFD1Q8WVM8 642 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PIBF1Q8WXW3 757 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 STARD8Q92502 1023 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 MRPS31Q92665 395 aaKnown RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PTP4A1Q93096 173 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PSMG2Q969U7 264 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 MCHR2Q969V1 340 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 BIRC7Q96CA5 298 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 C14orf79Q96F83 325 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 PHYHIPLQ96FC7 376 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 MCCC1Q96RQ3 725 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 KIR2DL4Q99706 377 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CBWD1Q9BRT8 395 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 NDUFAF3Q9BU61 184 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 ST6GALNAC5Q9BVH7 336 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 C19orf24Q9BVV8 132 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 CACNG6Q9BXT2 260 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 OSBPL8Q9BZF1 889 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 LIME1Q9H400 295 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 IL1RL2Q9HB29 575 aa1.29□□□□□ -2.2
TNRC6A-210ENST00000563201 MCCC2Q9HCC0 563 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms