RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SLC35A1P78382 337 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 KCNJ10P78508 379 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 VLDLRP98155 873 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 TGFBR3Q03167 851 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 ANXA8L1Q5VT79 327 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 CYB5R2Q6BCY4 276 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 FRRS1Q6ZNA5 592 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 NUDCD3Q8IVD9 361 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 FAM71CQ8NEG0 241 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 MIPOL1Q8TD10 442 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 OIT3Q8WWZ8 545 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
SF3B3-202ENST00000562722 MUS81Q96NY9 551 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 SHARPINQ9H0F6 387 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 AKTIPQ9H8T0 292 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 EXOSC3Q9NQT5 275 aaKnown RBP11.4□□□□□ -0.58
SF3B3-202ENST00000562722 PARPBPQ9NWS1 579 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 ASIC5Q9NY37 505 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-202ENST00000562722 SLC9A8Q9Y2E8 581 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 AMDHD2Q9Y303 409 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 PMF1-BGLAPU3KQ54 211 aa11.4□□□□□ -0.58
SF3B3-202ENST00000562722 A0A096LNT2 108 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 TMED7-TICAM2A0A0A6YYA0 188 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 PRSS51A0A1B0GVH4 220 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 WDR91A4D1P6 747 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 ELOA3DA6NLF2 546 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 H7C417 338 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 EIF1BO60739 113 aaKnown RBP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 NUDT17P0C025 328 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 UQCRBP14927 111 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 CDH2P19022 906 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 USF1P22415 310 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 NTF4P34130 210 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 POLR2HP52434 150 aaKnown RBP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 EFNA4P52798 201 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 FUT5Q11128 374 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 CARTPTQ16568 116 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 ELOA3BQ3SY89 546 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 ADGRG3Q86Y34 549 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 C17orf78Q8N4C9 275 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 ELOA3Q8NG57 546 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 OR8J2Q8NGG1 315 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 CNOT9Q92600 299 aaKnown RBP11.39□□□□□ -0.59
SF3B3-202ENST00000562722 ZG16BQ96DA0 208 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 FBXO17Q96EF6 278 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 SLC35A5Q9BS91 424 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 AMBRA1Q9C0C7 1298 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 SLC17A5Q9NRA2 495 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 LGALS13Q9UHV8 139 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 DCTN4Q9UJW0 460 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 TRAPPC4Q9Y296 219 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 TMED7Q9Y3B3 224 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 FKBP7Q9Y680 259 aa11.39□□□□□ -0.59
SF3B3-202ENST00000562722 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 TMEM72A0PK05 275 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 ATP6V1G2-DDX39BF2Z307 99 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 AP3D1O14617 1153 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 KRT33AO76009 404 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 LY6HO94772 140 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 WNT11O96014 354 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 GUSBP08236 651 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 MYZAPP0CAP1 466 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 TACR3P29371 465 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-202ENST00000562722 PRPS1P60891 318 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 PHC1P78364 1004 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 GNA13Q14344 377 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 GGTLC2Q14390 218 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 SMU1Q2TAY7 513 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 TSPO2Q5TGU0 170 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 SAXO2Q658L1 398 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 LSRQ86X29 649 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-202ENST00000562722 RNF130Q86XS8 419 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 ZNF781Q8N8C0 355 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 WDR31Q8NA23 367 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 C1orf162Q8NEQ5 155 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-202ENST00000562722 C10orf105Q8TEF2 133 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 PMM1Q92871 262 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 NEURL3Q96EH8 262 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 KCNS3Q9BQ31 491 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 SAP130Q9H0E3 1048 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 CHODLQ9H9P2 273 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 SLC7A10Q9NS82 523 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 MOKQ9UQ07 419 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 FLVCR1Q9Y5Y0 555 aa11.38□□□□□ -0.59
SF3B3-202ENST00000562722 KLF11O14901 512 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 ZNF208O43345 1280 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 ITM2AO43736 263 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 SCN2BO60939 215 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 SERPINE1P05121 402 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 IGHV4-31P0DP07 118 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 IMPDH2P12268 514 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 CREB1P16220 341 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 IL7RP16871 459 aa11.37□□□□□ -0.59
SF3B3-202ENST00000562722 S100A3P33764 101 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms