RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MOB1BQ7L9L4 216 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 SKA3Q8IX90 412 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 MTURNQ8N3F0 131 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 OR56B4Q8NH76 319 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 ZPLD1Q8TCW7 415 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 COQ2Q96H96 371 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 CCT7Q99832 543 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 ZNF670Q9BS34 389 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 SLC35A5Q9BS91 424 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 NAT10Q9H0A0 1025 aaKnown RBP4.56□□□□□ -1.68
SMG1-204ENST00000561940 VCPKMTQ9H867 229 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 ZNF702PQ9H963 129 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 POPDC2Q9HBU9 364 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 NANSQ9NR45 359 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 PRR34Q9NV39 138 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 VNN3Q9NY84 501 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 UBQLN1Q9UMX0 589 aaKnown RBP4.56□□□□□ -1.68
SMG1-204ENST00000561940 ROBO1Q9Y6N7 1651 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 SETD5Q9C0A6 1442 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 CXCL13O43927 109 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 UGT2B17O75795 530 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 IGHV3-23P01764 117 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 GCFC2P16383 781 aaKnown RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 HMGB2P26583 209 aaKnown RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 HOXD10P28358 340 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 RDXP35241 583 aaKnown RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 GRIA1P42261 906 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 TNFRSF17Q02223 184 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 FGL1Q08830 312 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 MESDQ14696 234 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 PDZK1Q5T2W1 519 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 Q6ZPB1 254 aaPredicted RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 SLC35F2Q8IXU6 374 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 C11orf42Q8N5U0 333 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 OR10H4Q8NGA5 316 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 SERAC1Q96JX3 654 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 CCNL2Q96S94 520 aaPredicted RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 KLHDC3Q9BQ90 382 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 ZNF385DQ9H6B1 395 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 ONECUT1Q9UBC0 465 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 CDH9Q9ULB4 789 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 PLLPQ9Y342 182 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 ZNF646O15015 1829 aaPredicted RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 PZPP20742 1482 aa4.55□□□□□ -1.68
SMG1-204ENST00000561940 SCAF11Q99590 1463 aaKnown RBP4.55□□□□□ -1.68
SMG1-204ENST00000561940 A0A1B0GUS0 222 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 K7N7A8 449 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 RGS16O15492 202 aaPredicted RBP4.54□□□□□ -1.68
SMG1-204ENST00000561940 OR10H3O60404 316 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 HCN1O60741 890 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 SLITRK3O94933 977 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 DIRAS1O95057 198 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 IGHG4P01861 327 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 CAPN1P07384 714 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 RBMY1CP0DJD4 496 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 IMPDH1P20839 514 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 GCAP28676 217 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 AQP1P29972 269 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 NMT1P30419 496 aaKnown RBP4.54□□□□□ -1.68
SMG1-204ENST00000561940 DAP3P51398 398 aaKnown RBP4.54□□□□□ -1.68
SMG1-204ENST00000561940 EFNB2P52799 333 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 BIDP55957 195 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 IGLV3-21P80748 117 aaPredicted RBP4.54□□□□□ -1.68
SMG1-204ENST00000561940 KIAA0040Q15053 153 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 BEND3Q5T5X7 828 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 OR4F3Q6IEY1 312 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 UQCC3Q6UW78 93 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 NLRP9Q7RTR0 991 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 C11orf53Q8IXP5 236 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 ZBED8Q8IZ13 594 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 CEND1Q8N111 149 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 MFSD9Q8NBP5 474 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 RAPGEF5Q92565 580 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 SLC38A2Q96QD8 506 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 MTMR9Q96QG7 549 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 SRXN1Q9BYN0 137 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 SLITRK2Q9H156 845 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 LRRC40Q9H9A6 602 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 C6orf203Q9P0P8 240 aaPredicted RBP4.54□□□□□ -1.68
SMG1-204ENST00000561940 ATRNO75882 1429 aa4.54□□□□□ -1.68
SMG1-204ENST00000561940 COL16A1Q07092 1604 aaPredicted RBP4.54□□□□□ -1.68
SMG1-204ENST00000561940 PRDM15P57071 1507 aaPredicted RBP4.53□□□□□ -1.68
SMG1-204ENST00000561940 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 SYNJ2BP-COX16A0A087WUM0 186 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 TRDCB7Z8K6 153 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 POU2F1P14859 743 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 MAGEA8P43361 318 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 CCT3P49368 545 aaKnown RBP4.53□□□□□ -1.68
SMG1-204ENST00000561940 DIO3P55073 304 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 GRB7Q14451 532 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
SMG1-204ENST00000561940 GPRC6AQ5T6X5 926 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 METTL11BQ5VVY1 283 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 CCDC137Q6PK04 289 aaKnown RBP4.53□□□□□ -1.68
SMG1-204ENST00000561940 ZNF584Q8IVC4 421 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 SVOPLQ8N434 492 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 ZNF184Q99676 751 aaPredicted RBP4.53□□□□□ -1.68
SMG1-204ENST00000561940 TUBGCP2Q9BSJ2 902 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 POLE4Q9NR33 117 aa4.53□□□□□ -1.68
SMG1-204ENST00000561940 PHF11Q9UIL8 331 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms