RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 REEP3Q6NUK4 255 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 RETREG3Q86VR2 466 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 NFKBIDQ8NI38 313 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 DDIT4LQ96D03 193 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 ZHX1-C8orf76Q96EF9 292 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF300Q96RE9 604 aaPredicted RBP13.75□□□□□ -0.21
CCDC113-203ENST00000561517 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 RSPO3Q9BXY4 272 aaPredicted RBP13.75□□□□□ -0.21
CCDC113-203ENST00000561517 CACYBPQ9HB71 228 aaKnown RBP13.75□□□□□ -0.21
CCDC113-203ENST00000561517 TMEM181Q9P2C4 612 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.75□□□□□ -0.21
CCDC113-203ENST00000561517 EDARQ9UNE0 448 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 ALPK2Q86TB3 2170 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 CELSR1Q9NYQ6 3014 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 THBDP07204 575 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 TROVE2P10155 538 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC113-203ENST00000561517 IMPDH2P12268 514 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 PRG2P13727 222 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 OR3A2P47893 321 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 COPZ1P61923 177 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 H3F3AP84243 136 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 POU4F3Q15319 338 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 ADRM1Q16186 407 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 CGB2Q6NT52 195 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 PAMR1Q6UXH9 720 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 DHDDSQ86SQ9 333 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 CGREF1Q99674 301 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 POTEKPQ9BYX7 375 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 CCDC134Q9H6E4 229 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 FGFR1OP2Q9NVK5 253 aa13.74□□□□□ -0.21
CCDC113-203ENST00000561517 C6orf203Q9P0P8 240 aaPredicted RBP13.74□□□□□ -0.21
CCDC113-203ENST00000561517 ZC3H12DA2A288 527 aaKnown RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF716A6NP11 495 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF814B7Z6K7 855 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 ANGPT2O15123 496 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 EIF1BO60739 113 aaKnown RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 CXCR1P25024 350 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 LOXP28300 417 aaPredicted RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 PRKAR1BP31321 381 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 SLC16A1P53985 500 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 OR2B6P58173 313 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 SLC35A1P78382 337 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 SCARB2Q14108 478 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 DHRS4L2Q6PKH6 230 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 CXorf67Q86X51 503 aaPredicted RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 CADM2Q8N3J6 435 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 PIGXQ8TBF5 258 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 DNAJA3Q96EY1 480 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 ZC3HAV1LQ96H79 300 aaKnown RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 ANKRD27Q96NW4 1050 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 FOXC2Q99958 501 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 HDHD5Q9BXW7 423 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 ACTR6Q9GZN1 396 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 MED4Q9NPJ6 270 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 CCM2LQ9NUG4 571 aaPredicted RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 EMC3Q9P0I2 261 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 PLEKHA6Q9Y2H5 1048 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 MAP1AP78559 2803 aaPredicted RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 HEATR1Q9H583 2144 aaKnown RBP13.73□□□□□ -0.21
CCDC113-203ENST00000561517 PLCE1Q9P212 2302 aa13.73□□□□□ -0.21
CCDC113-203ENST00000561517 RAMP1O60894 148 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 RAF1P04049 648 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 SLC6A2P23975 617 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 DNASE1P24855 282 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 EDNRAP25101 427 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 ART1P52961 327 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 ARFIP2P53365 341 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 P2RY6Q15077 328 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 SFRP5Q5T4F7 317 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 Q6ZT83 130 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 LSRQ86X29 649 aaPredicted RBP13.72□□□□□ -0.21
CCDC113-203ENST00000561517 KRT73Q86Y46 540 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 PTOV1Q86YD1 416 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 STEAP2Q8NFT2 490 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF775Q96BV0 537 aaPredicted RBP13.72□□□□□ -0.21
CCDC113-203ENST00000561517 MBD6Q96DN6 1003 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 SPATA5L1Q9BVQ7 753 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 MRGBPQ9NV56 204 aa13.72□□□□□ -0.21
CCDC113-203ENST00000561517 ACANP16112 2415 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 LIPT2A6NK58 231 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 A8MVM7 634 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 TMEM229AB2RXF0 380 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 GPR171O14626 319 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 KLF4O43474 513 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 FRS3O43559 492 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 NPIPB7O75200 414 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 ATE1O95260 518 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 CNOT4O95628 575 aaKnown RBP13.71□□□□□ -0.21
CCDC113-203ENST00000561517 ADAP00813 363 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 FPR1P21462 350 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
CCDC113-203ENST00000561517 RBBP4Q09028 425 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms