RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 HNF4AP41235 474 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ASMTP46597 345 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TRPC1P48995 793 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ASCL1P50553 236 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RAB28P51157 221 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 POLR2JP52435 117 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 PHEXP78562 749 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SSBP2P81877 361 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 RPA4Q13156 261 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RCAN2Q14206 197 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 HIST2H2ACQ16777 129 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 IMPG1Q17R60 797 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TMEM249Q2WGJ8 235 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ATP13A5Q4VNC0 1218 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 PAGE2BQ5JRK9 111 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 C6orf136Q5SQH8 315 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 FAM182AQ5T1J6 154 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 INTS11Q5TA45 600 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 OGFRL1Q5TC84 451 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 IL23RQ5VWK5 629 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 LIPJQ5W064 366 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 LRRC66Q68CR7 880 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 REP15Q6BDI9 236 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CLEC6AQ6EIG7 209 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 HIST2H2AA3Q6FI13 130 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RTL6Q6ICC9 239 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 LCN8Q6JVE9 175 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 C8orf82Q6P1X6 216 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 SBSNQ6UWP8 590 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CCBE1Q6UXH8 406 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 IL20RBQ6UXL0 311 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 UNC5DQ6UXZ4 953 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 DEF8Q6ZN54 512 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 MOB3CQ70IA8 216 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 GOLGA7Q7Z5G4 137 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SPATA24Q86W54 205 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 KLHDC8AQ8IYD2 350 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CPNE9Q8IYJ1 553 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TBC1D21Q8IYX1 336 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ST13P4Q8IZP2 240 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 FAM185AQ8N0U4 392 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 BEST3Q8N1M1 668 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RAB42Q8N4Z0 105 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CLDN19Q8N6F1 224 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 NATD1Q8N6N6 113 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 L3MBTL4Q8NA19 623 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 FNDC5Q8NAU1 212 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TMEM178AQ8NBL3 297 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RELL2Q8NC24 303 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 GPR26Q8NDV2 337 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 MDS2Q8NDY4 140 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 DDHD1Q8NEL9 900 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TRPV3Q8NET8 790 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 OR8J3Q8NGG0 315 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 OR52E4Q8NGH9 312 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SKA2Q8WVK7 121 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 SMPDL3BQ92485 455 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 EXT2Q93063 718 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 GLYATL1Q969I3 302 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SLC25A28Q96A46 364 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 VPS33AQ96AX1 596 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RHBDF1Q96CC6 855 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 FBXL8Q96CD0 374 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CCDC124Q96CT7 223 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 COQ8BQ96D53 544 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 MSI2Q96DH6 328 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 PIK3IP1Q96FE7 263 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 DTD2Q96FN9 168 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SCMH1Q96GD3 660 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 LINC00615Q96LM1 132 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 PPP1R36Q96LQ0 422 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 FRG2BQ96QU4 278 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 MYCBPQ99417 103 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 UTP23Q9BRU9 249 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 CCM2Q9BSQ5 444 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SPATA16Q9BXB7 569 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 UGT2B28Q9BY64 529 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SHCBP1LQ9BZQ2 653 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 PCBD2Q9H0N5 130 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 EHD1Q9H4M9 534 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ELOVL6Q9H5J4 265 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 NOL11Q9H8H0 719 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 BRF2Q9HAW0 419 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 PNRC2Q9NPJ4 139 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 SEMA4BQ9NPR2 832 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 ZNF701Q9NV72 531 aaPredicted RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 DNAJC11Q9NVH1 559 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 C1orf109Q9NX04 203 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 AHSPQ9NZD4 102 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CCDC167Q9P0B6 97 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ACTR3BQ9P1U1 418 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ABCD2Q9UBJ2 740 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CD300AQ9UGN4 299 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TEKT2Q9UIF3 430 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CAMK2AQ9UQM7 478 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 WDR37Q9Y2I8 494 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 FIS1Q9Y3D6 152 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 FAM215AQ9Y5M1 114 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 KCNE2Q9Y6J6 123 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms