RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SERPINE2P07093 398 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 LINC00271P0C7V0 271 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OCM2P0CE71 109 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 NHLRC4P0CG21 123 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 GIMD1P0DJR0 217 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CD1DP15813 335 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PGAM1P18669 254 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SDC1P18827 310 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TCN1P20061 433 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 BCL3P20749 454 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ATP6V1B2P21281 511 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 BGNP21810 368 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PDHA2P29803 388 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 FCGR2CP31995 323 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CEACAM8P31997 349 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 EPHX2P34913 555 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SAA4P35542 130 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TNFSF9P41273 254 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MAP3K8P41279 467 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MAGEA2P43356 314 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZFP36L2P47974 494 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 RFX2P48378 723 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RFX5P48382 616 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 GLUD2P49448 558 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PCYT1AP49585 367 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 DAP3P51398 398 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 GPM6AP51674 278 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CCNHP51946 323 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 HSPA2P54652 639 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 GAS1P54826 345 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 UCNP55089 124 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 DSTNP60981 165 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MAGOHP61326 146 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 ADARB1P78563 741 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 PITPNAQ00169 270 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 DHODHQ02127 395 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TLE4Q04727 773 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SLC10A7Q0GE19 358 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RAB40BQ12829 278 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ECH1Q13011 328 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TRAF1Q13077 416 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 FADDQ13158 208 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SELENBP1Q13228 472 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 FASTKQ14296 549 aaKnown RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 TMEM187Q14656 261 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TSC22D1Q15714 1073 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 UPP1Q16831 310 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ATP6V1FQ16864 119 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SLC5A12Q1EHB4 618 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RGS21Q2M5E4 152 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 QRICH1Q2TAL8 776 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 C5orf47Q569G3 176 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SAPCD1Q5SSQ6 148 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 TPRG1LQ5T0D9 272 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 LCE2AQ5TA79 106 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 PXDC1Q5TGL8 231 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZNF691Q5VV52 312 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ADNP2Q6IQ32 1131 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ADAM5Q6NVV9 412 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SHC4Q6S5L8 630 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PAQR6Q6TCH4 344 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SASS6Q6UVJ0 657 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 GFRALQ6UXV0 394 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 HACD2Q6Y1H2 254 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZNF621Q6ZSS3 439 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CYS1Q717R9 158 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PGAP1Q75T13 922 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SLC35D2Q76EJ3 337 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 BHLHA15Q7RTS1 189 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 PTF1AQ7RTS3 328 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SSX7Q7RTT5 188 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SETD3Q86TU7 594 aaPredicted RBP1.78□□□□□ -2.12
RTF1-207ENST00000561076 TMEM219Q86XT9 240 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 C1QL4Q86Z23 238 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 APRG1Q8IVJ8 170 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZNF100Q8IYN0 542 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 CMTM1Q8IZ96 169 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 MCOLN2Q8IZK6 566 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 KIRREL3Q8IZU9 778 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 IQCKQ8N0W5 287 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 FBXL14Q8N1E6 418 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SLC39A11Q8N1S5 342 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PELI3Q8N2H9 469 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 BPIFB2Q8N4F0 458 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 KIR3DL3Q8N743 410 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 NANOGP1Q8N7R0 232 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SAMD12Q8N8I0 201 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 C8orf31Q8N9H6 132 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ACOT4Q8N9L9 421 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 LRRC75AQ8NAA5 344 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 ZNF248Q8NDW4 579 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 SEMA6DQ8NFY4 1073 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR4D9Q8NGE8 314 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR9Q2Q8NGE9 314 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR52H1Q8NGJ2 320 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR6K6Q8NGW6 343 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR6K2Q8NGY2 324 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 OR2G2Q8NGZ5 317 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 RFESDQ8TAC1 157 aa1.78□□□□□ -2.12
RTF1-207ENST00000561076 PLPPR1Q8TBJ4 325 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms