RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GAREM2Q75VX8 874 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 LNX2Q8N448 690 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 TNFAIP8L1Q8WVP5 186 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ANKRD10Q9NXR5 420 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 PURGQ9UJV8 347 aaKnown RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 TET1Q8NFU7 2136 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 A0A0A6YYD5 115 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 RIIAD1A6NNX1 92 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 SNRPGP15A8MWD9 76 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ITGA10O75578 1167 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 TYRP1P17643 537 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 SRMP19623 302 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 AKR1C2P52895 323 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 AKR1C1Q04828 323 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 FGL1Q08830 312 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 CBFBQ13951 182 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 CDK5R1Q15078 307 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 PUS10Q3MIT2 529 aaKnown RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 ZNF805Q5CZA5 627 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 OR56A1Q8NGH5 318 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 PXYLP1Q8TE99 480 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 TFGQ92734 400 aaPredicted RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 SMIM19Q96E16 107 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 SCLYQ96I15 445 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ADAT1Q9BUB4 502 aaKnown RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 ESRP2Q9H6T0 727 aaKnown RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 KRCC1Q9NPI7 259 aaPredicted RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 FBXL3Q9UKT7 428 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 MOKQ9UQ07 419 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ZNF443Q9Y2A4 671 aaPredicted RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 C4orf51C9J302 202 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 CDK2P24941 298 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 GPR1P46091 355 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 HOXA1P49639 335 aaPredicted RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 PRR5P85299 388 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 OVCH1Q7RTY7 1134 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 NPAS4Q8IUM7 802 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 MUC20Q8N307 709 aaPredicted RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 DNAAF1Q8NEP3 725 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ADAMTS15Q8TE58 950 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 S100A16Q96FQ6 103 aaKnown RBP15.22■□□□□ 0.03
TPM1-228ENST00000560975 SLC35A4Q96G79 324 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 PRSS27Q9BQR3 290 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 PBX4Q9BYU1 374 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 FOXJ3Q9UPW0 622 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 DENND4CQ5VZ89 1909 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 OR5K4A6NMS3 321 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 IFITM5A6NNB3 132 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 MPTX1A8MV57 137 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 IDSB3KWA1 339 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 GPR31O00270 319 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 LEFTY2O00292 366 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 KPNA3O00505 521 aaPredicted RBP15.21■□□□□ 0.03
TPM1-228ENST00000560975 PIN1P1O15428 100 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 OLFM2O95897 454 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 IL5P05113 134 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 TMIGD3P0DMS9 266 aaPredicted RBP15.21■□□□□ 0.03
TPM1-228ENST00000560975 PRKAR1BP31321 381 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 ZNF836Q6ZNA1 936 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 DPPA4Q7L190 304 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 SLC16A11Q8NCK7 471 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 OR2AK2Q8NG84 335 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 OR5T2Q8NGG2 359 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 OR4C6Q8NH72 309 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 SNX33Q8WV41 574 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 CDS1Q92903 461 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 COL26A1Q96A83 441 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 OTUB2Q96DC9 234 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 CLDND1Q9NY35 253 aa15.21■□□□□ 0.03
TPM1-228ENST00000560975 USP36Q9P275 1121 aaKnown RBP15.21■□□□□ 0.03
TPM1-228ENST00000560975 EMC8O43402 210 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 ERI3O43414 337 aaKnown RBP15.21■□□□□ 0.02
TPM1-228ENST00000560975 DPP4P27487 766 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 GMFBP60983 142 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 FKBP1BP68106 108 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 SIRPAP78324 504 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 REEP5Q00765 189 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 SLC9A5Q14940 896 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 TCTN1Q2MV58 587 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 OLFML2AQ68BL7 652 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 C17orf99Q6UX52 265 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 TMEM64Q6YI46 380 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 TMEM239Q8WW34 195 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 WNT2BQ93097 391 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 DNTTIP1Q9H147 329 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 ZNF304Q9HCX3 659 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 CCL26Q9Y258 94 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 INSL5Q9Y5Q6 135 aa15.21■□□□□ 0.02
TPM1-228ENST00000560975 ABHD14A-ACY1A0A1B0GW23 586 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 MEIS3P1A6NDR6 274 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 STARP49675 285 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 TMEM215Q68D42 235 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 TMEM185AQ8NFB2 350 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 SLC39A1Q9NY26 324 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 SPTBP11277 2137 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 A0A087WV48 116 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 NPIPA5A0A0B4J1W7 369 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
TPM1-228ENST00000560975 NPIPA7E9PJI5 369 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms