RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 EDNRAP25101 427 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 TACR3P29371 465 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 CRISP3P54108 245 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 EPS8Q12929 822 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 RGNQ15493 299 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 PAGE3Q5JUK9 113 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 ZNF836Q6ZNA1 936 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.05□□□□□ -0.32
IDH3A-219ENST00000560414 GABRG1Q8N1C3 465 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 PMM1Q92871 262 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 MAL2Q969L2 176 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 SPDL1Q96EA4 605 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 MAGEB18Q96M61 343 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 BCO1Q9HAY6 547 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 SLC52A3Q9NQ40 469 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 SLC25A37Q9NYZ2 338 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 TMED7Q9Y3B3 224 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-219ENST00000560414 DSPPQ9NZW4 1301 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 ZNF814B7Z6K7 855 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 KLF4O43474 513 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 ADAP00813 363 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 PSMB1P20618 241 aaKnown RBP13.04□□□□□ -0.32
IDH3A-219ENST00000560414 LOXP28300 417 aaPredicted RBP13.04□□□□□ -0.32
IDH3A-219ENST00000560414 SLC1A3P43003 542 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 CSNK2A1P68400 391 aaPredicted RBP13.04□□□□□ -0.32
IDH3A-219ENST00000560414 AGKQ53H12 422 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 MTDHQ86UE4 582 aaKnown RBP13.04□□□□□ -0.32
IDH3A-219ENST00000560414 WFDC8Q8IUA0 241 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 MSRB3Q8IXL7 192 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 C10orf111Q8N326 155 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 CLIP4Q8N3C7 705 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 MBD6Q96DN6 1003 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 PRSS50Q9UI38 385 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 ZNF443Q9Y2A4 671 aaPredicted RBP13.04□□□□□ -0.32
IDH3A-219ENST00000560414 GPR52Q9Y2T5 361 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 ROS1P08922 2347 aa13.04□□□□□ -0.32
IDH3A-219ENST00000560414 A0A0G2JPF8 293 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 ZC3H12DA2A288 527 aaKnown RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 HNRNPCL2B2RXH8 293 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 HNRNPCL3B7ZW38 293 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 HNRNPCL1O60812 293 aaKnown RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 RAMP1O60894 148 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 PMS2P2O95744 297 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 HNRNPCL4P0DMR1 293 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 PRG2P13727 222 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 PPP3CBP16298 524 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 CD53P19397 219 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 ACAA2P42765 397 aaKnown RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 HTR3AP46098 478 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 POLR2HP52434 150 aaKnown RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 OR2B6P58173 313 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 DEFB113Q30KQ7 82 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 LRIF1Q5T3J3 769 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 CCDC103Q8IW40 242 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 ALPK1Q96QP1 1244 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 TACO1Q9BSH4 297 aaKnown RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 UBTD1Q9HAC8 227 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 THUMPD1Q9NXG2 353 aaKnown RBP13.03□□□□□ -0.32
IDH3A-219ENST00000560414 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 HDGFL3Q9Y3E1 203 aa13.03□□□□□ -0.32
IDH3A-219ENST00000560414 TMEM247A6NEH6 219 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 A6NHS1 94 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ZNF724A8MTY0 619 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 FAAHO00519 579 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 IMPDH2P12268 514 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 NCF2P19878 526 aaPredicted RBP13.02□□□□□ -0.33
IDH3A-219ENST00000560414 OR3A2P47893 321 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 CLK1P49759 484 aaKnown RBP13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ATP4BP51164 291 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 FADDQ13158 208 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 SQLEQ14534 574 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 LARS2Q15031 903 aaKnown RBP13.02□□□□□ -0.33
IDH3A-219ENST00000560414 SFRP5Q5T4F7 317 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ABLIM2Q6H8Q1 611 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 GALNT5Q7Z7M9 940 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 CADM2Q8N3J6 435 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 STEAP2Q8NFT2 490 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ZHX1-C8orf76Q96EF9 292 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ADAM19Q9H013 955 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 RAD21L1Q9H4I0 556 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 IKZF5Q9H5V7 419 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 NPHS2Q9NP85 383 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 TMEM181Q9P2C4 612 aa13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ZNF469Q96JG9 3925 aaPredicted RBP13.02□□□□□ -0.33
IDH3A-219ENST00000560414 ZNF716A6NP11 495 aa13.01□□□□□ -0.33
IDH3A-219ENST00000560414 ZNF208O43345 1280 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms