RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZNF550Q7Z398 422 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 TUSC5Q8IXB3 177 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 ARL5BQ96KC2 179 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 ANKRD27Q96NW4 1050 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 PSD2Q9BQI7 771 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 RSPO3Q9BXY4 272 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 ARMC7Q9H6L4 198 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 KLHL9Q9P2J3 617 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 TRAPPC4Q9Y296 219 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 TMED7Q9Y3B3 224 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 IGKV3D-15A0A087WSY6 115 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF724A8MTY0 619 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 C5orf58C9J3I9 102 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 SULT2B1O00204 365 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 ANGPT2O15123 496 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 GKN3PP0CG01 181 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 CRYGSP22914 178 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 PRKAR1BP31321 381 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 H3F3AP84243 136 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 CDK6Q00534 326 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 POU4F3Q15319 338 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF311Q5JNZ3 666 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 ABLIM2Q6H8Q1 611 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 REEP3Q6NUK4 255 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 TFAP2EQ6VUC0 442 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 BEND4Q6ZU67 534 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 DHDDSQ86SQ9 333 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 MTDHQ86UE4 582 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 STK32CQ86UX6 486 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 POM121Q96HA1 1249 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 CGREF1Q99674 301 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 OR10A4Q9H209 315 aa13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 CACYBPQ9HB71 228 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-210ENST00000560383 IGHV3-15A0A0B4J1V0 119 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 TMEM72A0PK05 275 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 DEFB108AA8MXU0 73 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 FESP07332 822 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 VIMP08670 466 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 TFPIP10646 304 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 PRG2P13727 222 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 PSMB1P20618 241 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 MDH1P40925 334 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 KCNJ5P48544 419 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 ARFIP2P53365 341 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 WBP2NLQ6ICG8 309 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 DHRS4L2Q6PKH6 230 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 STAC2Q6ZMT1 411 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 NUFIP2Q7Z417 695 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 SERPINA11Q86U17 422 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 NFKBIDQ8NI38 313 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF317Q96PQ6 595 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 PIP5K1AQ99755 562 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 FANCFQ9NPI8 374 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 TMEM181Q9P2C4 612 aa13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF716A6NP11 495 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 FBP2O00757 339 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SIAH2O43255 324 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 GCM2O75603 506 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 PPP3CBP16298 524 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SLC6A2P23975 617 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 ADSLP30566 484 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 OR3A2P47893 321 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SLC16A1P53985 500 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 COPZ1P61923 177 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 RBBP4Q09028 425 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 RASGEF1BQ0VAM2 473 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SCARB2Q14108 478 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 COQ5Q5HYK3 327 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SHEQ5VZ18 495 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 CXorf67Q86X51 503 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 PTOV1Q86YD1 416 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 LRRC75A-AS1Q8N1F1 130 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 DDIT4LQ96D03 193 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SPATA5L1Q9BVQ7 753 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 POTEKPQ9BYX7 375 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 C12orf49Q9H741 205 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 KAT8Q9H7Z6 458 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 KLHL28Q9NXS3 571 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 KLHL14Q9P2G3 628 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 GPR52Q9Y2T5 361 aa13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 NSD1Q96L73 2696 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-210ENST00000560383 ZC3H12DA2A288 527 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 EIF1BO60739 113 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 NPIPB7O75200 414 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 IMPDH2P12268 514 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 CCNA2P20248 432 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 CXCR1P25024 350 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 PCBP3P57721 371 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 SLC35A1P78382 337 aa13.46□□□□□ -0.25
SNRPA1-210ENST00000560383 KLF10Q13118 480 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms