RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 RPL38P63173 70 aaKnown RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 PPP2R2BQ00005 443 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 BST1Q10588 318 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 MLC1Q15049 377 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CHI3L2Q15782 390 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 IMPG1Q17R60 797 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 TMEM176BQ3YBM2 270 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 VPS26BQ4G0F5 336 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 DNAL1Q4LDG9 190 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SLC25A53Q5H9E4 307 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 PPP4R4Q6NUP7 873 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ZCCHC12Q6PEW1 402 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 FCRLAQ7L513 359 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 OLIG3Q7RTU3 272 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 DTX2Q86UW9 622 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 MISPQ8IVT2 679 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 C10orf107Q8IVU9 208 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 PHC2Q8IXK0 858 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ZNF619Q8N2I2 560 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 STEAP2Q8NFT2 490 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 OR7A2PQ8NGA2 310 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CEP70Q8NHQ1 597 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 FBXO27Q8NI29 283 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SMAP2Q8WU79 429 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 FBXW5Q969U6 566 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CPNE4Q96A23 557 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 PPCDCQ96CD2 204 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SLC7A6OSQ96CW6 309 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 CCDC126Q96EE4 140 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ZBED6CLQ96FA7 236 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 C3orf30Q96M34 536 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ZNF300Q96RE9 604 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 STACQ99469 402 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 TRAF4Q9BUZ4 470 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 BTBD2Q9BX70 525 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 TMEM120AQ9BXJ8 343 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 HDHD5Q9BXW7 423 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 PIGUQ9H490 435 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 DCLRE1BQ9H816 532 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 BCO1Q9HAY6 547 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 BATF3Q9NR55 127 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 DUSP22Q9NRW4 184 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 GIN1Q9NXP7 522 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SH3BP4Q9P0V3 963 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ATP6V1HQ9UI12 483 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 LIPT1Q9Y234 373 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CARD8Q9Y2G2 431 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 RNF115Q9Y4L5 304 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ANK2Q01484 3957 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CADP27708 2225 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 WDR91A4D1P6 747 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 C9JVG2 144 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 SCDO00767 359 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 EREGO14944 169 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 AZIN1O14977 448 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 SCAMP2O15127 329 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 GYG2O15488 501 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 CLOCKO15516 846 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 RGS14O43566 566 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 CD5LO43866 347 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 FCMRO60667 390 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 CYTIPO60759 359 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 LYZL6O75951 148 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 PRKD3O94806 890 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 PGM3O95394 542 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 C1QCP02747 245 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 CD3EP07766 207 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 YES1P07947 543 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 FGF4P08620 206 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 COX5AP20674 150 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 IGHV1-2P23083 117 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 EIF1P41567 113 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 P2RX1P51575 399 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 FOXG1P55316 489 aaPredicted RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 C21orf58P58505 322 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 RAC3P60763 192 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 NAA20P61599 178 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 POU6F2P78424 691 aaPredicted RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 SKP2Q13309 424 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 ITGADQ13349 1161 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 VEZF1Q14119 521 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 LASP1Q14847 261 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 PTGR1Q14914 329 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 P2RY6Q15077 328 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 RNPS1Q15287 305 aaKnown RBP5.11□□□□□ -1.59
USP3-215ENST00000559771 XKR7Q5GH72 579 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 DCST2Q5T1A1 773 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 LIPMQ5VYY2 423 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 C11orf71Q6IPW1 123 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 CDC73Q6P1J9 531 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 B3GLCTQ6Y288 498 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 Q6ZT83 130 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 STK32CQ86UX6 486 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 HIPK1Q86Z02 1210 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 RIMKLAQ8IXN7 391 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 KRTCAP2Q8N6L1 136 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 COX18Q8N8Q8 333 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 OR10H5Q8NGA6 315 aa5.11□□□□□ -1.59
USP3-215ENST00000559771 OR5D16Q8NGK9 328 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms