RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 GALNT5Q7Z7M9 940 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 SERPINA11Q86U17 422 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 MTDHQ86UE4 582 aaKnown RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 UBE2J2Q8N2K1 259 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 CLIP4Q8N3C7 705 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 STEAP2Q8NFT2 490 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 STON2Q8WXE9 905 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 NINJ1Q92982 152 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 KISS1RQ969F8 398 aaPredicted RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 S100PBPQ96BU1 408 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 CPPED1Q9BRF8 314 aaPredicted RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 NAA11Q9BSU3 229 aaPredicted RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 SPATA5L1Q9BVQ7 753 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 TAPBPLQ9BX59 468 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 UBTD1Q9HAC8 227 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 BCO1Q9HAY6 547 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 BCL2L10Q9HD36 194 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 TMEM45AQ9NWC5 275 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PRSS50Q9UI38 385 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 ANGPT4Q9Y264 503 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 GPR52Q9Y2T5 361 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 NOSIPQ9Y314 301 aaKnown RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 TACC2O95359 2948 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 AKAP6Q13023 2319 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 SPG11Q96JI7 2443 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 TRBV5-3A0A0A0MS03 114 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 ZC3H12DA2A288 527 aaKnown RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 PRORSD1PA6NEY8 169 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ELOA3DA6NLF2 546 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 ZNF724A8MTY0 619 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 GPR171O14626 319 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ZNF208O43345 1280 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 DNPH1O43598 174 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 LYZL6O75951 148 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 IGHV3-9P01782 118 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 IMPDH2P12268 514 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ETS2P15036 469 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 PSMB1P20618 241 aaKnown RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 GTF2E2P29084 291 aaKnown RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 ACAA2P42765 397 aaKnown RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 OR3A2P47893 321 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 RGS8P57771 180 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 GUCY1A3Q02108 690 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 CEACAM7Q14002 265 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 OR7A5Q15622 319 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ELOA3BQ3SY89 546 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 MMEL1Q495T6 779 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 RUNDC3AQ59EK9 446 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 BEX5Q5H9J7 111 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 OTUD3Q5T2D3 398 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 SFRP5Q5T4F7 317 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 METTL21CQ5VZV1 264 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 CASP12Q6UXS9 341 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 BHLHA15Q7RTS1 189 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 CCDC103Q8IW40 242 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 GABRG1Q8N1C3 465 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 C10orf111Q8N326 155 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 C11orf65Q8NCR3 313 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 HIPK4Q8NE63 616 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ELOA3Q8NG57 546 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 APH1AQ96BI3 265 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ZNF607Q96SK3 696 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 CGREF1Q99674 301 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 IKZF5Q9H5V7 419 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ZNF385DQ9H6B1 395 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 PLEKHF2Q9H8W4 249 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 MED4Q9NPJ6 270 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 SLC52A3Q9NQ40 469 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ADPRHL2Q9NX46 363 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 SELENONQ9NZV5 590 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 ING1Q9UK53 422 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 TRAPPC4Q9Y296 219 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 FREM1Q5H8C1 2179 aa7.27□□□□□ -1.25
SNX1-207ENST00000559401 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
SNX1-207ENST00000559401 A0A1W2PPR1 153 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 CIB4A0PJX0 185 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 CCT8L1PA6NM43 557 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 A8MVM7 634 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 DEFB108AA8MXU0 73 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 ZNF814B7Z6K7 855 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 SIAH2O43255 324 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 EIF1BO60739 113 aaKnown RBP7.26□□□□□ -1.25
SNX1-207ENST00000559401 RAMP1O60894 148 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 MRPL33O75394 65 aaKnown RBP7.26□□□□□ -1.25
SNX1-207ENST00000559401 GCM2O75603 506 aaPredicted RBP7.26□□□□□ -1.25
SNX1-207ENST00000559401 SERPINB7O75635 380 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 AKR7A3O95154 331 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 AHSA1O95433 338 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 OPN1SWP03999 348 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 GPIP06744 558 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 THBDP07204 575 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 GPX2P18283 190 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 EDNRAP25101 427 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 ADSLP30566 484 aaPredicted RBP7.26□□□□□ -1.25
SNX1-207ENST00000559401 PRKAR1BP31321 381 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 MAP2K6P52564 334 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 NR1H2P55055 460 aa7.26□□□□□ -1.25
SNX1-207ENST00000559401 ITGADQ13349 1161 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms