RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ZNF208O43345 1280 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 NPIPB7O75200 414 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 IGF2P01344 180 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 CELA3AP09093 270 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 ELK4P28324 431 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 PLEKHN1Q494U1 663 aaPredicted RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 WIPI1Q5MNZ9 446 aaPredicted RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 KDM4DQ6B0I6 523 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 RPUSD3Q6P087 351 aaKnown RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 FAM109AQ8N4B1 249 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 MAGEE2Q8TD90 523 aaPredicted RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 STK35Q8TDR2 534 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 DGCR6LQ9BY27 220 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 KRCC1Q9NPI7 259 aaPredicted RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 ZNF71Q9NQZ8 489 aaPredicted RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 KIF17Q9P2E2 1029 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 TMEFF2Q9UIK5 374 aaPredicted RBP16.33■□□□□ 0.2
CLPX-203ENST00000558958 LHX6Q9UPM6 363 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 PIEZO2Q9H5I5 2752 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 ZC3H12DA2A288 527 aaKnown RBP16.32■□□□□ 0.2
CLPX-203ENST00000558958 HPRP00739 348 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 ADAP00813 363 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 IFI30P13284 250 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 CRYZQ08257 329 aaKnown RBP16.32■□□□□ 0.2
CLPX-203ENST00000558958 SELENBP1Q13228 472 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.32■□□□□ 0.2
CLPX-203ENST00000558958 SLC6A19Q695T7 634 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 C3orf33Q6P1S2 294 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 C5orf46Q6UWT4 87 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 MEX3DQ86XN8 651 aaKnown RBP16.32■□□□□ 0.2
CLPX-203ENST00000558958 BPIFA2Q96DR5 249 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 GPA33Q99795 319 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 NIPSNAP1Q9BPW8 284 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 OR11A1Q9GZK7 315 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 VCXQ9H320 206 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 ZDHHC11Q9H8X9 412 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 ACKR4Q9NPB9 350 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 TMEM5Q9Y2B1 443 aa16.32■□□□□ 0.2
CLPX-203ENST00000558958 SPIN1Q9Y657 262 aaPredicted RBP16.32■□□□□ 0.2
CLPX-203ENST00000558958 HTR3EA5X5Y0 456 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 KLF4O43474 513 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 POU2F1P14859 743 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 ZNF24P17028 368 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 FKBP2P26885 142 aaKnown RBP16.31■□□□□ 0.2
CLPX-203ENST00000558958 GSSP48637 474 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 GFRA1P56159 465 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 SLC10A1Q14973 349 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 INAQ16352 499 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 C19orf48Q6RUI8 117 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 TMPRSS11FQ6ZWK6 438 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 CDK20Q8IZL9 346 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 GNPDA2Q8TDQ7 276 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 SLC25A43Q8WUT9 341 aaPredicted RBP16.31■□□□□ 0.2
CLPX-203ENST00000558958 GTPBP3Q969Y2 492 aaKnown RBP16.31■□□□□ 0.2
CLPX-203ENST00000558958 DDIT4LQ96D03 193 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 KTI12Q96EK9 354 aaPredicted RBP16.31■□□□□ 0.2
CLPX-203ENST00000558958 FAM46AQ96IP4 442 aaKnown RBP16.31■□□□□ 0.2
CLPX-203ENST00000558958 SFXN2Q96NB2 322 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 TAAR6Q96RI8 345 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 ZNF556Q9HAH1 456 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 BSNQ9UPA5 3926 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 ZNF337Q9Y3M9 751 aa16.31■□□□□ 0.2
CLPX-203ENST00000558958 TRAV36DV7A0A075B6V5 113 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 LINC01387J3KSC0 135 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 PEPDP12955 493 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 MAKP20794 623 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 IGFBP5P24593 272 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 FPR3P25089 353 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 GPR4P46093 362 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 RAC1P63000 192 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 NADK2Q4G0N4 442 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 SYT14P1Q58G82 188 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 C1orf140Q5VVS0 124 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 C1QL3Q5VWW1 255 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 CD300LDQ6UXZ3 194 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 EXD3Q8N9H8 876 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 ATP6V1C2Q8NEY4 427 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 DNAJC9Q8WXX5 260 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 TAAR8Q969N4 342 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 PNPLA2Q96AD5 504 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 PTDSS2Q9BVG9 487 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 POTEKPQ9BYX7 375 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 TMEM185BQ9H7F4 350 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 KRT84Q9NSB2 600 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 PKD1L2Q7Z442 2459 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 FREM3P0C091 2139 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 ITPR1Q14643 2758 aa16.3■□□□□ 0.2
CLPX-203ENST00000558958 H0YJX3 145 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 H3BML4 177 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 DLGAP1O14490 977 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 CDC42EP2O14613 210 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 TFECO14948 347 aaPredicted RBP16.29■□□□□ 0.2
CLPX-203ENST00000558958 MITFO75030 526 aaPredicted RBP16.29■□□□□ 0.2
CLPX-203ENST00000558958 CHMP24386 653 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 CLK1P49759 484 aaKnown RBP16.29■□□□□ 0.2
CLPX-203ENST00000558958 COX10Q12887 443 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 TSPAN31Q12999 210 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 KLHL17Q6TDP4 642 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 SGTBQ96EQ0 304 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms