RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TRIM33Q9UPN9 1127 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 SPIN1Q9Y657 262 aaPredicted RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 ZC3H12DA2A288 527 aaKnown RBP10.68□□□□□ -0.7
TPM1-216ENST00000558910 EVPLLA8MZ36 301 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 RAMP1O60894 148 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 ADAP00813 363 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 YES1P07947 543 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 TROVE2P10155 538 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM1-216ENST00000558910 CD8BP10966 210 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 UQCRBP14927 111 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 CXCR1P25024 350 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 PEX19P40855 299 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 APOBEC1P41238 236 aaKnown RBP10.68□□□□□ -0.7
TPM1-216ENST00000558910 POLR2HP52434 150 aaKnown RBP10.68□□□□□ -0.7
TPM1-216ENST00000558910 ARFIP2P53365 341 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 IST1P53990 364 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 RAC3P60763 192 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 COPZ1P61923 177 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 FOXD4Q12950 439 aaPredicted RBP10.68□□□□□ -0.7
TPM1-216ENST00000558910 NFYCQ13952 458 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 GUSBP1Q15486 140 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 STK11Q15831 433 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 TMPPEQ6ZT21 453 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 DHDDSQ86SQ9 333 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 STK32CQ86UX6 486 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 ZNF100Q8IYN0 542 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 UBE2J2Q8N2K1 259 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 DACH2Q96NX9 599 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 RAD21L1Q9H4I0 556 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 UBTD1Q9HAC8 227 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 CALML5Q9NZT1 146 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 LEF1Q9UJU2 399 aaPredicted RBP10.68□□□□□ -0.7
TPM1-216ENST00000558910 NDUFAF1Q9Y375 327 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 TESMINQ9Y4I5 508 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 ABCA4P78363 2273 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
TPM1-216ENST00000558910 C2CD3Q4AC94 2353 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 A0A0G2JPF8 293 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 A0A1W2PP18 115 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 A0A1W2PPR1 153 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 HNRNPCL2B2RXH8 293 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ZNF814B7Z6K7 855 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 HNRNPCL3B7ZW38 293 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 HNRNPCL1O60812 293 aaKnown RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 LYZL6O75951 148 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 OPN1SWP03999 348 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 HRGP04196 525 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 HNRNPCL4P0DMR1 293 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 RPS4Y1P22090 263 aaKnown RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 CBLP22681 906 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ATP4BP51164 291 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 CSNK2A1P68400 391 aaPredicted RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 TXNL4AP83876 142 aaKnown RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 CDK6Q00534 326 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 CEACAM7Q14002 265 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 SCARB2Q14108 478 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 DAZAP2Q15038 168 aaPredicted RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 RNPS1Q15287 305 aaKnown RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 OR7A5Q15622 319 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 CYP51A1Q16850 503 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 C9orf135Q5VTT2 229 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 CGB2Q6NT52 195 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 P3H2Q8IVL5 708 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 BBS10Q8TAM1 723 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 DDIT4LQ96D03 193 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ZHX1-C8orf76Q96EF9 292 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 PSD2Q9BQI7 771 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ACTR6Q9GZN1 396 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 RABEP2Q9H5N1 569 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 A4GALTQ9NPC4 353 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 SLC52A3Q9NQ40 469 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 EXOSC3Q9NQT5 275 aaKnown RBP10.67□□□□□ -0.7
TPM1-216ENST00000558910 PLSCR4Q9NRQ2 329 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ADPRHL2Q9NX46 363 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ELOVL5Q9NYP7 299 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 ZNF226Q9NYT6 803 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 KLHL9Q9P2J3 617 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 RPS6KB2Q9UBS0 482 aa10.67□□□□□ -0.7
TPM1-216ENST00000558910 LOC100653049A0A140TA62 436 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 CDHR4A6H8M9 788 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 TPST1O60507 370 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 KRT34O76011 436 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 PGM3O95394 542 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 IMPDH2P12268 514 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 HOXB9P17482 250 aaPredicted RBP10.66□□□□□ -0.7
TPM1-216ENST00000558910 FPR1P21462 350 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 IL32P24001 234 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 DNASE1P24855 282 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 SLC1A3P43003 542 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 FADDQ13158 208 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 KEAP1Q14145 624 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 MMEL1Q495T6 779 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 GLIPR1L2Q4G1C9 344 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 LRIF1Q5T3J3 769 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 TFAP2EQ6VUC0 442 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 BEND4Q6ZU67 534 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 GPAT4Q86UL3 456 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 CMIPQ8IY22 773 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms