RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PRAMEF6Q5VXH4 476 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 RAD9BQ6WBX8 426 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 MEX3BQ6ZN04 569 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM228AQ86W67 206 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SERPINA9Q86WD7 417 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CDR2LQ86X02 465 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CDH26Q8IXH8 852 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLC35F2Q8IXU6 374 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRR22Q8IZ63 422 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLC35B4Q969S0 331 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SGK3Q96BR1 496 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF486Q96H40 463 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 JSRP1Q96MG2 331 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SYT11Q9BT88 431 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ST6GALNAC5Q9BVH7 336 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 AUNIPQ9H7T9 357 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 MLXQ9UH92 298 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 GNPTGQ9UJJ9 305 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 RPL36Q9Y3U8 105 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 HYDINQ4G0P3 5121 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 DMXL1Q9Y485 3027 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 AQRO60306 1485 aaKnown RBP eCLIP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCDC144AA2RUR9 1427 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 A0A0B4J2A0 478 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 A0A0J9YYE9 177 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF840PA6NDX5 716 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 EFCAB7A8K855 629 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ERVV-2B6SEH9 535 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SULT2B1O00204 365 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 WWP2O00308 870 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 LRRTM2O43300 516 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 LYPLA1O75608 230 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SURF6O75683 361 aaKnown RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PTBP3O95758 552 aaKnown RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRBC1P01850 177 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ALDOBP05062 364 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 CASP14P31944 242 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 CYLC1P35663 651 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 FDFT1P37268 417 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 OPRD1P41143 372 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 RAB10P61026 200 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 DMTNQ08495 405 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ITPK1Q13572 414 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 TMEM187Q14656 261 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SF3A2Q15428 464 aaKnown RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 TGIF1Q15583 401 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 UBE2SQ16763 222 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PPP1R3AQ16821 1122 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 XKR7Q5GH72 579 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 MS4A13Q5J8X5 152 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 COA6Q5JTJ3 125 aaKnown RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR4C11Q6IEV9 310 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 TMIGD1Q6UXZ0 262 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 KRTAP5-5Q701N2 237 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SCD5Q86SK9 330 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SMIM29Q86T20 159 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ECHDC2Q86YB7 292 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 KBTBD3Q8NAB2 608 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR1N2Q8NGR9 330 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 KCNG3Q8TAE7 436 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PHOSPHO2Q8TCD6 241 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 AGAP11Q8TF27 550 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 NR4A3Q92570 626 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PPP1R16AQ96I34 528 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 REEP4Q9H6H4 257 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 FOLH1BQ9HBA9 442 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 LRRC4Q9HBW1 653 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 NT5MQ9NPB1 228 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 MIEF1Q9NQG6 463 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SHPKQ9UHJ6 478 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 BTNL2Q9UIR0 455 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 KLHL21Q9UJP4 597 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ADAM28Q9UKQ2 775 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRAF3IP3Q9Y228 551 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 L3MBTL1Q9Y468 752 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 BCL9O00512 1426 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 WRNQ14191 1432 aaPredicted RBP eCLIP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ASTN1O14525 1302 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAPK8IP3Q9UPT6 1336 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SMIM28A0A1B0GU29 152 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRR23D1E9PI22 279 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 K7ERI5 159 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 SOCS3O14543 225 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 AIM2O14862 343 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR10H3O60404 316 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 GALR3O60755 368 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PIGRP01833 764 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 IGHG4P01861 327 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 IGF1P05019 195 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRR23D2P0DMB1 279 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 B4GALT1P15291 398 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 CALCRP30988 508 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 TNFSF9P41273 254 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 P2RY1P47900 373 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 DUSP3P51452 185 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 PEX3P56589 373 aa1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 VSX2P58304 361 aaPredicted RBP1.1□□□□□ -2.23
CTDSPL2-202ENST00000558373 ERVPABLB-1P60509 514 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms