RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PRAMEF25A6NGN4 478 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 AGAP5A6NIR3 686 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 OR10H2O60403 315 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 UPK1BO75841 260 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 OPN1SWP03999 348 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 ADORA3P0DMS8 318 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 NT5EP21589 574 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 GADD45AP24522 165 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 ETV6P41212 452 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 KHKP50053 298 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 SNRPGP62308 76 aaKnown RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 TP53BP2Q13625 1128 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 ZNF267Q14586 743 aaPredicted RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 TMEM201Q5SNT2 666 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 MEDAGQ5VYS4 303 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 RNLSQ5VYX0 342 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 ZCCHC12Q6PEW1 402 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 BTLAQ7Z6A9 289 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 MRGPRGQ86SM5 289 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 GALNT12Q8IXK2 581 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 NUP43Q8NFH3 380 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 OR2M7Q8NG81 312 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 NUBPLQ8TB37 319 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 PROX1Q92786 737 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 HOXB13Q92826 284 aaPredicted RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 RPL3LQ92901 407 aaKnown RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 Q96MT0 163 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 MS4A4EQ96PG1 132 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 NIPSNAP1Q9BPW8 284 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 CNPPD1Q9BV87 410 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 SERHL2Q9H4I8 314 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 SIAEQ9HAT2 523 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 MKLN1Q9UL63 735 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 PEX16Q9Y5Y5 336 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 DSPPQ9NZW4 1301 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 LRBAP50851 2863 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 NINQ8N4C6 2090 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 A0A1B0GTH9 108 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 PNMA8CA0A1B0GUJ8 204 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 FAM166BA8MTA8 275 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 C5orf58C9J3I9 102 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 PRSS44E7EML9 344 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 HMGN4O00479 90 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 FAAHO00519 579 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 DYRK3O43781 588 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 CDC40O60508 579 aaKnown RBP eCLIP9.38□□□□□ -0.91
TPM1-212ENST00000558347 SOX30O94993 753 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 SNX4O95219 450 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 CT62P0C5K7 136 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 CCL3P10147 92 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 ABOP16442 354 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 S1PR1P21453 382 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 CHMP24386 653 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 GRNP28799 593 aaKnown RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 C21orf33P30042 268 aaPredicted RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 SLC15A1P46059 708 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 IDH2P48735 452 aaKnown RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 MAN2A2P49641 1150 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 RGS6P49758 472 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 CRISP1P54107 249 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 CASP6P55212 293 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 SLC37A1P57057 533 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 IFITM3Q01628 133 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 ST3GAL4Q11206 333 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 EBPQ15125 230 aaKnown RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 CDSNQ15517 529 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 ZNF770Q6IQ21 691 aaPredicted RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 MFSD12Q6NUT3 480 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 MTFR2Q6P444 385 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 FAM111BQ6SJ93 734 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 OPN5Q6U736 354 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 C3P1Q6ZMU1 363 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 RTL4Q6ZR62 310 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 TAGAPQ8N103 731 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 VWA5B2Q8N398 1253 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 ZNF808Q8N4W9 903 aaPredicted RBP9.38□□□□□ -0.91
TPM1-212ENST00000558347 LINC00471Q8N535 108 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 RIT1Q92963 219 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 ART5Q96L15 291 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 GAL3ST4Q96RP7 486 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 ACTRT3Q9BYD9 372 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 TTTY12Q9BZ98 90 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 OR51I1Q9H343 314 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 RLIMQ9NVW2 624 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 MEMO1Q9Y316 297 aa9.38□□□□□ -0.91
TPM1-212ENST00000558347 DUXAA6NLW8 204 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 ADAM10O14672 748 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 COQ9O75208 318 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 CBX7O95931 251 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 AGR2O95994 175 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 PTTG1O95997 202 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 OSMP13725 252 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 TNFRSF1BP20333 461 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 CNR1P21554 472 aa9.37□□□□□ -0.91
TPM1-212ENST00000558347 SSTR4P31391 388 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms