RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LPAR4Q99677 370 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 OPA3Q9H6K4 179 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 MRC1P22897 1456 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 A0A0D9SG52 128 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 IGHV3-9P01782 118 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 F13BP05160 661 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 CALCBP10092 127 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 FUT1P19526 365 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 RPL11P62913 178 aaKnown RBP13.05□□□□□ -0.32
SPG11-210ENST00000558319 RFPL4BQ6ZWI9 263 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 RHOXF1Q8NHV9 184 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 NECTIN4Q96NY8 510 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 MSTNO14793 375 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 SLC10A3P09131 477 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 TAS2R19P59542 299 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 IRF4Q15306 451 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 ESCO2Q56NI9 601 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 TMEM217Q8N7C4 229 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 OR5L2Q8NGL0 311 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 OR6F1Q8NGZ6 308 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 H1FXQ92522 213 aaKnown RBP13.05□□□□□ -0.32
SPG11-210ENST00000558319 DPF1Q92782 380 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 SPTSSAQ969W0 71 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 UTP4Q969X6 686 aaKnown RBP13.05□□□□□ -0.32
SPG11-210ENST00000558319 TXNDC15Q96J42 360 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 EGLN3Q9H6Z9 239 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 CPNE7Q9UBL6 633 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 OR6C76A6NM76 312 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 SOCS7O14512 581 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 DNAJB6O75190 326 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 HTR4Q13639 388 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 CGB2Q6NT52 195 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 SBSNQ6UWP8 590 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 PRAMEF27A3QJZ7 478 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 KITLGP21583 273 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 TSFMP43897 325 aaKnown RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 RAP2BP61225 183 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 RPS25P62851 125 aaKnown RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 FCN2Q15485 313 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 PRAMEF9Q5VWM5 478 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ZBED3Q96IU2 234 aaPredicted RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 ZNF582Q96NG8 517 aaPredicted RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 FAM103A1Q9BTL3 118 aaKnown RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 USP22Q9UPT9 525 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 SULT1C4O75897 302 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 DRD2P14416 443 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ZNF44P15621 663 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 RAB33AQ14088 237 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ADIRFQ15847 76 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 OR9A4Q8NGU2 314 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 DVL3Q92997 716 aaPredicted RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 NTMT1Q9BV86 223 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 BABAM2Q9NXR7 383 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 G0S2P27469 103 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 PRDX3P30048 256 aaKnown RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 PGM2L1Q6PCE3 622 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 GDPGP1Q6ZNW5 385 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 TMEM200AQ86VY9 491 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 OR10R2Q8NGX6 335 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ZNF300Q96RE9 604 aaPredicted RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 ZFYVE21Q9BQ24 234 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 SLC22A23A1A5C7 686 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 EMP2P54851 167 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 TAS2R30P59541 319 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ABHD12BQ7Z5M8 362 aaPredicted RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 KDM1BQ8NB78 822 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 AVL9Q8NBF6 648 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 OR56B4Q8NH76 319 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 TMEM239Q8WW34 195 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ZDHHC7Q9NXF8 308 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 TMEM82A0PJX8 343 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 ITGAMP11215 1152 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 GM2AP17900 193 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 HNRNPA2B1P22626 353 aaKnown RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 TAGLNQ01995 201 aaKnown RBP13.04□□□□□ -0.32
SPG11-210ENST00000558319 ADAM5Q6NVV9 412 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 FAM57BQ71RH2 274 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 NEIL2Q969S2 332 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.326e-7■■■■□ 20.8
SPG11-210ENST00000558319 OLAHQ9NV23 265 aa13.04□□□□□ -0.32
SPG11-210ENST00000558319 MEGF11A6BM72 1044 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 ADAM10O14672 748 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 SCO1O75880 301 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PFKMP08237 780 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 DHRS4L1P0CG22 281 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 FOLR1P15328 257 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 GPX3P22352 226 aa13.03□□□□□ -0.32
SPG11-210ENST00000558319 PCGF2P35227 344 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms