RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 BTBD10Q9BSF8 475 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 INPP5KQ9BT40 448 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 LMF2Q9BU23 707 aaKnown RBP4.9□□□□□ -1.63
RTF1-204ENST00000558117 PITPNM3Q9BZ71 974 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 ZYG11BQ9C0D3 744 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 CARD9Q9H257 536 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 FAM60AQ9NP50 221 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 TRPC4Q9UBN4 977 aa4.9□□□□□ -1.63
RTF1-204ENST00000558117 ALPK2Q86TB3 2170 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 DNAH7Q8WXX0 4024 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 HEATR5AQ86XA9 2040 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 A8MUI8 341 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 M0QYV0 167 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 BCKDKO14874 412 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 EPORP19235 508 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 CEACAM8P31997 349 aaPredicted RBP4.89□□□□□ -1.63
RTF1-204ENST00000558117 PCGF2P35227 344 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 VEGFCP49767 419 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 MLF1P58340 268 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 CX3CL1P78423 397 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 VWC2Q2TAL6 325 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 PHLDA2Q53GA4 152 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 KRT39Q6A163 491 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 FAM166AQ6J272 317 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 MFSD7Q6UXD7 560 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 C11orf57Q6ZUT1 292 aaPredicted RBP4.89□□□□□ -1.63
RTF1-204ENST00000558117 TMPRSS11FQ6ZWK6 438 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 ABHD13Q7L211 337 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 ARHGAP24Q8N264 748 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 UXS1Q8NBZ7 420 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 SPACA9Q96E40 222 aaPredicted RBP4.89□□□□□ -1.63
RTF1-204ENST00000558117 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 IMMP1LQ96LU5 166 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 MS4A10Q96PG2 267 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 DEFB127Q9H1M4 99 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 ATP13A3Q9H7F0 1226 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 SLC35D1Q9NTN3 355 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 PIGVQ9NUD9 493 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 PANK4Q9NVE7 773 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 DNAJC11Q9NVH1 559 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 B3GAT1Q9P2W7 334 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 ATXN10Q9UBB4 475 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 TRIM10Q9UDY6 481 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 ZNF629Q9UEG4 869 aaPredicted RBP4.89□□□□□ -1.63
RTF1-204ENST00000558117 C3orf18Q9UK00 162 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 KIAA1257Q9ULG3 409 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 ANGPTL3Q9Y5C1 460 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 CSMD3Q7Z407 3707 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 FRAS1Q86XX4 4008 aa4.89□□□□□ -1.63
RTF1-204ENST00000558117 DOCK4Q8N1I0 1966 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 RBMY1BA6NDE4 496 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 RBMY1EA6NEQ0 496 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 CHUKO15111 745 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 ST8SIA3O43173 380 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 SLC16A8O95907 504 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 VIMP08670 466 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 RBMY1DP0C7P1 496 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 OR2T7P0C7T2 308 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 ICAM2P13598 275 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 ETS1P14921 441 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 ZNF7P17097 686 aaPredicted RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 AHCYP23526 432 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 PRDX3P30048 256 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 CSNK1DP48730 415 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 GAMTQ14353 236 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 DEFB110Q30KQ9 67 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 MAJINQ3KP22 176 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 BRMS1LQ5PSV4 323 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 SLC25A24Q6NUK1 477 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 RGS9BPQ6ZS82 235 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 STXBP4Q6ZWJ1 553 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 PHLDB2Q86SQ0 1253 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 CRLF3Q8IUI8 442 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 ELMOD2Q8IZ81 293 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 MAPKAPK5-AS1Q8N8E1 139 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 ZFP62Q8NB50 900 aaPredicted RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 KATNB1Q9BVA0 655 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 RIOK2Q9BVS4 552 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 OSBPL8Q9BZF1 889 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 EQTNQ9NQ60 294 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 FAM207AQ9NSI2 230 aaPredicted RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 DMAC2Q9NW81 257 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 FBXW2Q9UKT8 454 aa4.88□□□□□ -1.63
RTF1-204ENST00000558117 TDRKHQ9Y2W6 561 aaKnown RBP4.88□□□□□ -1.63
RTF1-204ENST00000558117 A0A1B0GX78 115 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 IGLV1-44P01699 117 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
RTF1-204ENST00000558117 VCLP18206 1134 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 CRYGSP22914 178 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 TIA1P31483 386 aaKnown RBP eCLIP4.87□□□□□ -1.63
RTF1-204ENST00000558117 MAGEA4P43358 317 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 ACADSBP45954 432 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 GCLMP48507 274 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 ZNF136P52737 540 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 MTTPP55157 894 aa4.87□□□□□ -1.63
RTF1-204ENST00000558117 RPS4XP62701 263 aaKnown RBP4.87□□□□□ -1.63
RTF1-204ENST00000558117 OC90Q02509 493 aaPredicted RBP4.87□□□□□ -1.63
RTF1-204ENST00000558117 BCL2L1Q07817 233 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms