RNA–Protein interactions for RNA: ENST00000557975.5

ETFA-204, Transcript of electron transfer flavoprotein subunit alpha, human

TSL 3

Gene ETFA, Length 1,086 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ETFA-204	ENST00000557975		G3V4G9	280 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	AIRE	O43918	545 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	TNFSF13	O75888	250 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	CA1	P00915	261 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	TSPY4	P0CV99	314 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	TSPY10	P0CW01	314 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	TPSB2	P20231	275 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	SHMT2	P34897	504 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	DAP3	P51398	398 aa	Known RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	ZNF136	P52737	540 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	RAP1B	P61224	184 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	SLA	Q13239	276 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	TPSAB1	Q15661	275 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	ZNF571	Q7Z3V5	609 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	RALGPS2	Q86X27	583 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	LYPD1	Q8N2G4	141 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	DENND6B	Q8NEG7	585 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	OR10G3	Q8NGC4	313 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	STARD8	Q92502	1023 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	NDRG1	Q92597	394 aa	Known RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	CEP170P1	Q96L14	293 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	P2RY13	Q9BPV8	354 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	RSPO3	Q9BXY4	272 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	GPR61	Q9BZJ8	451 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	POLR1E	Q9GZS1	481 aa	Known RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	HSD3B7	Q9H2F3	369 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	RHBG	Q9H310	441 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	TPK1	Q9H3S4	243 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	AATF	Q9NY61	560 aa	Known RBP eCLIP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	RBAK	Q9NYW8	714 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	ZNF282	Q9UDV7	671 aa	Predicted RBP	2.56	□□□□□ -2
ETFA-204	ENST00000557975	TBK1	Q9UHD2	729 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	PLEKHH1	Q9ULM0	1364 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	PTCH1	Q13635	1447 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	ABCC9	O60706	1549 aa		2.56	□□□□□ -2
ETFA-204	ENST00000557975	PPIAL4E	A0A075B759	164 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	PPIAL4D	F5H284	164 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	CTAGE5	O15320	804 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	SLIT3	O75094	1523 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	LRAT	O95237	230 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	PPIAL4F	P0DN26	164 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	RFC4	P35249	363 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	KIR2DS4	P43632	304 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	CAMLG	P49069	296 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	HSD17B7	P56937	341 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	NSUN5P1	Q3KNT7	163 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	TIGD3	Q6B0B8	471 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	2.55	□□□□□ -2
ETFA-204	ENST00000557975	KIAA1328	Q86T90	577 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	TPRX1	Q8N7U7	411 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	OR9G1	Q8NH87	305 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	MRPL38	Q96DV4	380 aa	Known RBP	2.55	□□□□□ -2
ETFA-204	ENST00000557975	SEC22A	Q96IW7	307 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	TSNARE1	Q96NA8	513 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	CCNL2	Q96S94	520 aa	Predicted RBP	2.55	□□□□□ -2
ETFA-204	ENST00000557975	NAT9	Q9BTE0	207 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	MRPL13	Q9BYD1	178 aa	Known RBP	2.55	□□□□□ -2
ETFA-204	ENST00000557975	C1orf21	Q9H246	121 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	FOLH1B	Q9HBA9	442 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	GNPTG	Q9UJJ9	305 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	GSTK1	Q9Y2Q3	226 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975	CLCA3P	Q9Y6N3	262 aa		2.55	□□□□□ -2
ETFA-204	ENST00000557975		A0A0G2JN53	185 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	TMEM150B	A6NC51	233 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	AGPAT2	O15120	278 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	CHAD	O15335	359 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	PTBP3	O95758	552 aa	Known RBP	2.54	□□□□□ -2
ETFA-204	ENST00000557975	MBD3	O95983	291 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	LGALS2	P05162	132 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	GAP43	P17677	238 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	HPCAL1	P37235	193 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	SLC26A3	P40879	764 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	HSPA2	P54652	639 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	PDZK1IP1	Q13113	114 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	PSG5	Q15238	335 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	ACOT1	Q86TX2	421 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	MFSD6L	Q8IWD5	586 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	TMEM61	Q8N0U2	210 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	CLDN19	Q8N6F1	224 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	CCDC54	Q8NEL0	328 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	NPB	Q8NG41	125 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	ZNF596	Q8TC21	504 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	HTR3C	Q8WXA8	447 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	ARPC1A	Q92747	370 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	KRT23	Q9C075	422 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	IFI27L2	Q9H2X8	130 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	LHX9	Q9NQ69	397 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	SMPD3	Q9NY59	655 aa	Predicted RBP	2.54	□□□□□ -2
ETFA-204	ENST00000557975	DEC1	Q9P2X7	70 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	GNG12	Q9UBI6	72 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	COPS3	Q9UNS2	423 aa		2.54	□□□□□ -2
ETFA-204	ENST00000557975	TRDC	B7Z8K6	153 aa		2.53	□□□□□ -2
ETFA-204	ENST00000557975	C11orf94	C9JXX5	98 aa		2.53	□□□□□ -2
ETFA-204	ENST00000557975	NPIPA7	E9PJI5	369 aa		2.53	□□□□□ -2
ETFA-204	ENST00000557975	LANCL1	O43813	399 aa		2.53	□□□□□ -2
ETFA-204	ENST00000557975	NPIPA8	P0DM63	369 aa		2.53	□□□□□ -2
ETFA-204	ENST00000557975	IGFBP3	P17936	291 aa	Predicted RBP	2.53	□□□□□ -2
ETFA-204	ENST00000557975	TBP	P20226	339 aa		2.53	□□□□□ -2
ETFA-204	ENST00000557975	UQCRC2	P22695	453 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms