RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 KIAA1549Q9HCM3 1950 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 ELOA3DA6NLF2 546 aaPredicted RBP22.9■■□□□ 1.26
SMAD6-202ENST00000557916 CPSF4LA6NMK7 179 aaKnown RBP22.9■■□□□ 1.26
SMAD6-202ENST00000557916 HSPB2A8KAH6 182 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 SULT2B1O00204 365 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 DIO1P49895 249 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 MYBPHQ13203 477 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 HSPB2Q16082 182 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 ELOA3BQ3SY89 546 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 XKRXQ6PP77 449 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 ELOA3Q8NG57 546 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 ASB5Q8WWX0 329 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 CPNE4Q96A23 557 aaPredicted RBP22.9■■□□□ 1.26
SMAD6-202ENST00000557916 SLC47A1Q96FL8 570 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 HSH2DQ96JZ2 352 aa22.9■■□□□ 1.26
SMAD6-202ENST00000557916 DCAF13Q9NV06 445 aaKnown RBP22.9■■□□□ 1.26
SMAD6-202ENST00000557916 PCNX1Q96RV3 2341 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 ZC3H12DA2A288 527 aaKnown RBP22.89■■□□□ 1.25
SMAD6-202ENST00000557916 A8MVM7 634 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 ARPC2O15144 300 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 RCBTB2O95199 551 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 PNMTP11086 282 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 FCGR2AP12318 317 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 AGAP20933 346 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 CDH12P55289 794 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 RAC3P60763 192 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 CSNK2A1P68400 391 aaPredicted RBP22.89■■□□□ 1.25
SMAD6-202ENST00000557916 DNAL1Q4LDG9 190 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 ZNF613Q6PF04 617 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 DEF8Q6ZN54 512 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 FKBP9P1Q75LS8 142 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 NAXEQ8NCW5 288 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 ADAMTS16Q8TE57 1224 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 SLC38A4Q969I6 547 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 DNAJA3Q96EY1 480 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 BTBD10Q9BSF8 475 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 THTPAQ9BU02 230 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 ARHGAP21Q5T5U3 1957 aa22.89■■□□□ 1.25
SMAD6-202ENST00000557916 PDE5AO76074 875 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 AQP8O94778 261 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 CHRNB4P30926 498 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 ZNF239Q16600 458 aaKnown RBP22.88■■□□□ 1.25
SMAD6-202ENST00000557916 IFI44LQ53G44 452 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 OR2A2Q6IF42 318 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 INTS12Q96CB8 462 aaKnown RBP22.88■■□□□ 1.25
SMAD6-202ENST00000557916 NSMCE2Q96MF7 247 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 POTEKPQ9BYX7 375 aa22.88■■□□□ 1.25
SMAD6-202ENST00000557916 SAMD4AQ9UPU9 718 aaKnown RBP22.88■■□□□ 1.25
SMAD6-202ENST00000557916 DOPEY1Q5JWR5 2465 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 NCOA6Q14686 2063 aaPredicted RBP22.87■■□□□ 1.25
SMAD6-202ENST00000557916 TRAPPC13A5PLN9 417 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 ATP5HO75947 161 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 PMS2P2O95744 297 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 SWT1Q5T5J6 900 aaKnown RBP22.87■■□□□ 1.25
SMAD6-202ENST00000557916 TSPYL5Q86VY4 417 aaPredicted RBP22.87■■□□□ 1.25
SMAD6-202ENST00000557916 STK35Q8TDR2 534 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 GEMIN6Q8WXD5 167 aaKnown RBP22.87■■□□□ 1.25
SMAD6-202ENST00000557916 ROBO4Q8WZ75 1007 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 CLPTM1LQ96KA5 538 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 ZFP3Q96NJ6 502 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 RNF122Q9H9V4 155 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 TRAPPC4Q9Y296 219 aa22.87■■□□□ 1.25
SMAD6-202ENST00000557916 A0A087WUJ7 227 aa22.86■■□□□ 1.25
SMAD6-202ENST00000557916 IFNW1P05000 195 aa22.86■■□□□ 1.25
SMAD6-202ENST00000557916 TMIGD3P0DMS9 266 aaPredicted RBP22.86■■□□□ 1.25
SMAD6-202ENST00000557916 IMPDH2P12268 514 aa22.86■■□□□ 1.25
SMAD6-202ENST00000557916 GCNT2Q8N0V5 402 aa22.86■■□□□ 1.25
SMAD6-202ENST00000557916 CA5BP1Q8WTZ4 195 aa22.86■■□□□ 1.25
SMAD6-202ENST00000557916 POLR2J2Q9GZM3 115 aaKnown RBP22.86■■□□□ 1.25
SMAD6-202ENST00000557916 POLR2J3Q9H1A7 115 aaKnown RBP22.86■■□□□ 1.25
SMAD6-202ENST00000557916 CHP2O43745 196 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 NPIPB7O75200 414 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 ENPP1P22413 925 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 CTSSP25774 331 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 IDUAP35475 653 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 RASSF2P50749 326 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 OR2B6P58173 313 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 FOXF2Q12947 444 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 TRIM25Q14258 630 aaKnown RBP22.85■■□□□ 1.25
SMAD6-202ENST00000557916 CDSNQ15517 529 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 C1orf140Q5VVS0 124 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 AMBRA1Q9C0C7 1298 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 ACTR3BQ9P1U1 418 aa22.85■■□□□ 1.25
SMAD6-202ENST00000557916 ZNF629Q9UEG4 869 aaPredicted RBP22.85■■□□□ 1.25
SMAD6-202ENST00000557916 IGHV3-15A0A0B4J1V0 119 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 PRKD3O94806 890 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 THY1P04216 161 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 TAS2R41P59536 307 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 EGR4Q05215 589 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 PIN1Q13526 163 aaPredicted RBP22.84■■□□□ 1.25
SMAD6-202ENST00000557916 FCRLAQ7L513 359 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 SLC41A3Q96GZ6 507 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 MUC13Q9H3R2 512 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 SLC7A7Q9UM01 511 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 DOCK7Q96N67 2140 aa22.84■■□□□ 1.25
SMAD6-202ENST00000557916 DNPH1O43598 174 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 DNAJC8O75937 253 aaPredicted RBP22.83■■□□□ 1.25
SMAD6-202ENST00000557916 OR5F1O95221 314 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 LYPD3O95274 346 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 CLDN14O95500 239 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms