RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CEBPBP17676 345 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 PEBP1P30086 187 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 RAP2BP61225 183 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 RPE65Q16518 533 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 TMEM255AQ5JRV8 349 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 HES5Q5TA89 166 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF425Q6IV72 752 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 APOOLQ6UXV4 268 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 GLDNQ6ZMI3 551 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 ARL14Q8N4G2 192 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 POMGNT2Q8NAT1 580 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MOSPD2Q8NHP6 518 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 FCAMRQ8WWV6 532 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 TNFRSF13CQ96RJ3 184 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 SEC22CQ9BRL7 303 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 LIN7BQ9HAP6 207 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 NOX3Q9HBY0 568 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 GPN1Q9HCN4 374 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 CD93Q9NPY3 652 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 C12orf4Q9NQ89 552 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MBNL1Q9NR56 388 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 SDHAF2Q9NX18 166 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 NPIPA5A0A0B4J1W7 369 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 A0A1B0GTQ1 180 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NPIPA7E9PJI5 369 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 TRIM77I1YAP6 450 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 PEX12O00623 359 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SULT1B1O43704 296 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 TSPAN9O75954 239 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NPIPA8P0DM63 369 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NAGAP17050 411 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SRMP19623 302 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 RAD52P43351 418 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 MAP2K6P52564 334 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 ERVFC1P60507 584 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 PSMA6P60900 246 aaKnown RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 PLPP4Q5VZY2 271 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 FAM199XQ6PEV8 388 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF613Q6PF04 617 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 UNQ9370/PRO34162Q6UXP9 181 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 OR4N5Q8IXE1 308 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC35F2Q8IXU6 374 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC43A2Q8N370 569 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 COX18Q8N8Q8 333 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 GRHL3Q8TE85 626 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF578Q96N58 590 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF559Q9BR84 538 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 AIFM2Q9BRQ8 373 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 ADAP2Q9NPF8 381 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 PRSS16Q9NQE7 514 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 PHPT1Q9NRX4 125 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 PIPOXQ9P0Z9 390 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 USP36Q9P275 1121 aaKnown RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF69Q9UC07 566 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 GNG8Q9UK08 70 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 FBXL21Q9UKT6 434 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 FBXL3Q9UKT7 428 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 DOCK9Q9BZ29 2069 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 AIPO00170 330 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 GPRIN2O60269 458 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 CREBL2O60519 120 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 GNRH1P01148 92 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NAT1P18440 290 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 CXCL2P19875 107 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NFYAP23511 347 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 TLX1P31314 330 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NUP62P37198 522 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC39A5Q6ZMH5 540 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 GRASPQ7Z6J2 395 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 OR52E2Q8NGJ4 325 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 GCDHQ92947 438 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 WBP1Q96G27 269 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 MRPL48Q96GC5 212 aaKnown RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 TMPRSS13Q9BYE2 586 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 REG4Q9BYZ8 158 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 NOX4Q9NPH5 578 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 TAS2R5Q9NYW4 299 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 KCNE5Q9UJ90 142 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 SCML1Q9UN30 329 aa10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 C19orf53Q9UNZ5 99 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-211ENST00000557658 MFSD2BA6NFX1 497 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 IFITM5A6NNB3 132 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 TMEM127O75204 238 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 IFNA16P05015 189 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 CPMP14384 443 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 NAA10P41227 235 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 MRPS10P82664 201 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 ILF3Q12906 894 aaKnown RBP eCLIP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 HTR4Q13639 388 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 TRMT12Q53H54 448 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 OLFML2AQ68BL7 652 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 VN1R4Q7Z5H5 301 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 S100A16Q96FQ6 103 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 LINC00052Q96N35 136 aa10.88□□□□□ -0.67
VIPAS39-211ENST00000557658 LRFN5Q96NI6 719 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms