RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 KCMF1Q9P0J7 381 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 ICAM5Q9UMF0 924 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 PRELID1Q9Y255 219 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 SESN1Q9Y6P5 492 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 OR6C65A6NJZ3 312 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 HIDE1A8MVS5 230 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 G3V3Q6 166 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 AIPO00170 330 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 PCDH8O95206 1070 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 PPP1R3DO95685 299 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 LDOC1O95751 146 aaPredicted RBP15.02□□□□□ -0.01
SHMT2-232ENST00000557487 HPXP02790 462 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 SLC35G6P0C7Q6 338 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 IFNGR1P15260 489 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 PEBP1P30086 187 aaKnown RBP15.02□□□□□ -0.01
SHMT2-232ENST00000557487 ERVFC1P60507 584 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 TSPAN5P62079 268 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 OPCMLQ14982 345 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 ZSWIM7Q19AV6 140 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 SLC35D3Q5M8T2 416 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 FHL5Q5TD97 284 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 COX18Q8N8Q8 333 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 OR4D9Q8NGE8 314 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 COL26A1Q96A83 441 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 C6orf106Q9H6K1 298 aaPredicted RBP15.02□□□□□ -0.01
SHMT2-232ENST00000557487 SLC17A4Q9Y2C5 497 aa15.02□□□□□ -0.01
SHMT2-232ENST00000557487 MRPS23Q9Y3D9 190 aaKnown RBP15.02□□□□□ -0.01
SHMT2-232ENST00000557487 NOTCH4Q99466 2003 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 A0A0B4J2E0 115 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 A0A1B0GX12 115 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 SLC34A2O95436 690 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 TFP02787 698 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF888P0CJ79 500 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-232ENST00000557487 SMIM10L1P0DMW3 83 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF250P15622 560 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 FUT1P19526 365 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 ZP3P21754 424 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 DRD5P21918 477 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 ENPP1P22413 925 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 SSTR2P30874 369 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 CTNNB1P35222 781 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 VSX2P58304 361 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-232ENST00000557487 IRF4Q15306 451 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 GAB4Q2WGN9 574 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 TCTE1Q5JU00 501 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 FAM198BQ6UWH4 519 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 GLDNQ6ZMI3 551 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-232ENST00000557487 LINGO2Q7L985 606 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 PRSS42Q7Z5A4 293 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 GRASPQ7Z6J2 395 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-232ENST00000557487 CMTM4Q8IZR5 234 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 BEST4Q8NFU0 473 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 RPS4Y2Q8TD47 263 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 FCAMRQ8WWV6 532 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 NSMAFQ92636 917 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 SLC22A18Q96BI1 424 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 PEX11GQ96HA9 241 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 SMIM10Q96HG1 83 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF578Q96N58 590 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-232ENST00000557487 ZNF426Q9BUY5 554 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 RBCK1Q9BYM8 510 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 CD93Q9NPY3 652 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 MBNL1Q9NR56 388 aaKnown RBP15.01□□□□□ -0.01
SHMT2-232ENST00000557487 TAS2R5Q9NYW4 299 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 KCNK6Q9Y257 313 aa15.01□□□□□ -0.01
SHMT2-232ENST00000557487 TRBV2A0A0J9YWF9 115 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CENPVL1A0A0U1RR11 272 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 hCG_1807616A0A1W2PRN6 198 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 PLSCR5A0PG75 271 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 GXYLT2A0PJZ3 443 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 IFITM5A6NNB3 132 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 RFXAPO00287 272 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 B3GALT2O43825 422 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 GKN3PP0CG01 181 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CALCBP10092 127 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 PTGS2P35354 604 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CLDN2P57739 230 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 RPS11P62280 158 aaKnown RBP eCLIP15□□□□□ -0.01
SHMT2-232ENST00000557487 MESP2Q0VG99 397 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 RNASE12Q5GAN4 147 aaKnown RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 NHLRC3Q5JS37 347 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 C3P1Q6ZMU1 363 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 VN1R4Q7Z5H5 301 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 GRAMD2AQ8IUY3 354 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 SLC35F2Q8IXU6 374 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 GALNT11Q8NCW6 608 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 OR13C5Q8NGS8 318 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 OR14A16Q8NHC5 309 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 LHFPL5Q8TAF8 219 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 SNX33Q8WV41 574 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 ING5Q8WYH8 240 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 MS4A3Q96HJ5 214 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 TRIM2Q9C040 744 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 LYRM4Q9HD34 91 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 MEPEQ9NQ76 525 aaPredicted RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 SPHK1Q9NYA1 384 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 THAP10Q9P2Z0 257 aaPredicted RBP15□□□□□ -0.01
SHMT2-232ENST00000557487 GLS2Q9UI32 602 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 CLEC4AQ9UMR7 237 aa15□□□□□ -0.01
SHMT2-232ENST00000557487 RCE1Q9Y256 329 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms