RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 OR14A16Q8NHC5 309 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 LHFPL5Q8TAF8 219 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 SNX33Q8WV41 574 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 ING5Q8WYH8 240 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 MS4A3Q96HJ5 214 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 DEFB118Q96PH6 123 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 TRIM2Q9C040 744 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 LYRM4Q9HD34 91 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 MEPEQ9NQ76 525 aaPredicted RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 SPHK1Q9NYA1 384 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 THAP10Q9P2Z0 257 aaPredicted RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 GLS2Q9UI32 602 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 CLEC4AQ9UMR7 237 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 RCE1Q9Y256 329 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 OR1A2Q9Y585 309 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 CENPFP49454 3210 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 TRAV27A0A087WT01 109 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 RFXAPO00287 272 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 SYPP08247 313 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 SRMP19623 302 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 DRD3P35462 400 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 SELENOPP49908 381 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 CRYZQ08257 329 aaKnown RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 ZNF267Q14586 743 aaPredicted RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 ISXQ2M1V0 245 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 TP53I3Q53FA7 332 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 AGBL4Q5VU57 503 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 FAM199XQ6PEV8 388 aaPredicted RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 SSX6Q7RTT6 188 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 OR51A7Q8NH64 312 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 ARMC5Q96C12 935 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 S100A16Q96FQ6 103 aaKnown RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 AUNIPQ9H7T9 357 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 LIN7BQ9HAP6 207 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 RDH8Q9NYR8 311 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 HCN3Q9P1Z3 774 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 CHRNA9Q9UGM1 479 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 MOSPD1Q9UJG1 213 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 AK6Q9Y3D8 172 aaKnown RBP15□□□□□ -0.01
SHMT2-231ENST00000557433 ETV7Q9Y603 341 aa15□□□□□ -0.01
SHMT2-231ENST00000557433 CIB4A0PJX0 185 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 ANKRD20A5PA0PJZ0 165 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 MID1O15344 667 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 BRINP1O60477 761 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 CREBL2O60519 120 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-231ENST00000557433 OR2A4O95047 310 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 NDUFB2O95178 105 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 CLUP10909 449 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 EDNRAP25101 427 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 DIO1P49895 249 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 SCAND1P57086 179 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 POU6F2P78424 691 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-231ENST00000557433 HTRA4P83105 476 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-231ENST00000557433 PON3Q15166 354 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 B3GNTL1Q67FW5 361 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-231ENST00000557433 PRSS45Q7RTY3 260 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 CYB561A3Q8NBI2 242 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 KCT2Q8NC54 265 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 TM4SF19Q96DZ7 209 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 OR2A7Q96R45 310 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 MCCC2Q9HCC0 563 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 EVA1BQ9NVM1 165 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 MGAT4CQ9UBM8 478 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 DAPP1Q9UN19 280 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 SLC22A7Q9Y694 548 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 SPACA6W5XKT8 324 aa14.99□□□□□ -0.01
SHMT2-231ENST00000557433 L7N2F9 121 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 ACOT7O00154 380 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 CDK2AP1O14519 115 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 KHDRBS3O75525 346 aaKnown RBP14.98□□□□□ -0.01
SHMT2-231ENST00000557433 CFDP00746 253 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-231ENST00000557433 CEACAM5P06731 702 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 DPP4P27487 766 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 MAP3K8P41279 467 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SOX9P48436 509 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 VEGFCP49767 419 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 IL10RAQ13651 578 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 MEIOBQ8N635 442 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 ASB13Q8WXK3 278 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 OR14A2Q96R54 314 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 TNFRSF13CQ96RJ3 184 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 NKIRAS2Q9NYR9 191 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 ZNF281Q9Y2X9 895 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 PRRC2BQ5JSZ5 2229 aaKnown RBP14.98□□□□□ -0.01
SHMT2-231ENST00000557433 A0A0B4J203 849 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 OR52A4PA6NMU1 304 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 KRBOX1C9JBD0 128 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 GMDSO60547 372 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 B3GALNT1O75752 331 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SERPINI2O75830 405 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 RGS11O94810 467 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 ADH1BP00325 375 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 PTNP21246 168 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 CALCRP30988 508 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 FAUP35544 74 aaKnown RBP14.98□□□□□ -0.01
SHMT2-231ENST00000557433 ZNF626Q68DY1 528 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SLC6A19Q695T7 634 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SFRP4Q6FHJ7 346 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-231ENST00000557433 Q6ZTK2 550 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SLC35F3Q8IY50 421 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms