RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 BTG2P78543 158 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ACY1Q03154 408 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 EMX1Q04741 257 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 FUT5Q11128 374 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 FUT7Q11130 342 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 DYNC1I2Q13409 638 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 GINS1Q14691 196 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 EXOSC7Q15024 291 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 NCF4Q15080 339 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SEC23BQ15437 767 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SHBQ15464 509 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 GPR68Q15743 365 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 NEDD8Q15843 81 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 DEFB110Q30KQ9 67 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PLK5Q496M5 336 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 MEDAGQ5VYS4 303 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SLX4IPQ5VYV7 408 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PMS2CLQ68D20 193 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 LAIR2Q6ISS4 152 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PGBD2Q6P3X8 592 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TSSK4Q6SA08 328 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 KLHL17Q6TDP4 642 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF730Q6ZMV8 503 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 FRRS1Q6ZNA5 592 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 MBOAT2Q6ZWT7 520 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PRSS48Q7RTY5 328 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZER1Q7Z7L7 766 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 VRK2Q86Y07 508 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CLVS1Q8IUQ0 354 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 SLC35F3Q8IY50 421 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF440Q8IYI8 595 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ENTHD1Q8IYW4 607 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CLIP4Q8N3C7 705 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 GALNT15Q8N3T1 639 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 Q8NA96 180 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CLRN3Q8NCR9 226 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR4K5Q8NGD3 323 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR52R1Q8NGF1 315 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR4D11Q8NGI4 311 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR8J1Q8NGP2 316 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR13F1Q8NGS4 319 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR4C6Q8NH72 309 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR1L3Q8NH93 324 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CNIH3Q8TBE1 160 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PIGXQ8TBF5 258 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 FAM81AQ8TBF8 368 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TBC1D15Q8TC07 691 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SAP25Q8TEE9 199 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZFAND2BQ8WV99 257 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ACOT11Q8WXI4 607 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 FCGR1BQ92637 280 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PIGKQ92643 395 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 OSTF1Q92882 214 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 NAT6Q93015 286 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SENP5Q96HI0 755 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 HS6ST2Q96MM7 605 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 VSTM2LQ96N03 204 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SLC46A1Q96NT5 459 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 MCHR1Q99705 422 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 NIPSNAP1Q9BPW8 284 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 BCL7BQ9BQE9 202 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 COPS4Q9BT78 406 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 RSPO3Q9BXY4 272 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 PRRG3Q9BZD7 231 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TRIM2Q9C040 744 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 RBM38Q9H0Z9 239 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 ANKRA2Q9H9E1 313 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TMEM27Q9HBJ8 222 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF304Q9HCX3 659 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 Q9N2J8 555 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PRMT8Q9NR22 394 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 LANCL2Q9NS86 450 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 FGF21Q9NSA1 209 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 C14orf105Q9NVL8 296 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF226Q9NYT6 803 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PSORS1C1Q9UIG5 152 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 FBXO4Q9UKT5 387 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 RNF6Q9Y252 685 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF443Q9Y2A4 671 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 HEMK1Q9Y5R4 338 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 CLCA3PQ9Y6N3 262 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF106Q9H2Y7 1883 aaKnown RBP4.09□□□□□ -1.76
SRP54-212ENST00000556992 ANKRD36A6QL64 1941 aa4.09□□□□□ -1.76
SRP54-212ENST00000556992 DENND4CQ5VZ89 1909 aa4.09□□□□□ -1.76
SRP54-212ENST00000556992 PTPRZ1P23471 2315 aaPredicted RBP4.09□□□□□ -1.76
SRP54-212ENST00000556992 FASNP49327 2511 aaKnown RBP4.09□□□□□ -1.76
SRP54-212ENST00000556992 A0A087WUU8 490 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 A0A1B0GX78 115 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 IRGMA1A4Y4 181 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 LINC00473A8K010 186 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 A8MU76 341 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 C17orf105B2RV13 164 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 H3BMH7 237 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 M0R3G1 203 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 DSCR3O14972 297 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 POLR1CO15160 346 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 XPNPEP2O43895 674 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 KIAA0513O60268 411 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 TPST2O60704 377 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms