RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 C3orf49Q96BT1 292 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 ARL5BQ96KC2 179 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 CCT8L2Q96SF2 557 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 ZNF559Q9BR84 538 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 TRIM2Q9C040 744 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 C12orf10Q9HB07 376 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 KLHL9Q9P2J3 617 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 KLHL13Q9P2N7 655 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 KCNN3Q9UGI6 736 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 TESQ9UGI8 421 aaKnown RBP9.54□□□□□ -0.88
LINC00239-201ENST00000556973 CLEC4AQ9UMR7 237 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 PROCRQ9UNN8 238 aa9.54□□□□□ -0.88
LINC00239-201ENST00000556973 INTS1Q8N201 2190 aaKnown RBP9.54□□□□□ -0.88
LINC00239-201ENST00000556973 IGHV3-15A0A0B4J1V0 119 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 FAM220BPB1ANY3 271 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 NDUFAB1O14561 156 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 SMAD9O15198 467 aaKnown RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 EIF1BO60739 113 aaKnown RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 FAM107AO95990 144 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 FESP07332 822 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 PNMTP11086 282 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 FPR1P21462 350 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 AGTR1P30556 359 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 SSTR2P30874 369 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 RGS8P57771 180 aaPredicted RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 OR2B6P58173 313 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 SLC35A1P78382 337 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 HOXC5Q00444 222 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 RASGEF1BQ0VAM2 473 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 PDK3Q15120 406 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 TMEM201Q5SNT2 666 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 FAM91A1Q658Y4 838 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 ULK3Q6PHR2 472 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 BEND4Q6ZU67 534 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 GDF7Q7Z4P5 450 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 ATG4DQ86TL0 474 aaPredicted RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 COMTD1Q86VU5 262 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 RANBP3LQ86VV4 465 aaPredicted RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 TUSC5Q8IXB3 177 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 SLC15A3Q8IY34 581 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 ZNF295-AS1Q8N0V1 137 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 OR2T12Q8NG77 320 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 STK35Q8TDR2 534 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 ABHD3Q8WU67 409 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 DNAJA4Q8WW22 397 aaPredicted RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 C14orf79Q96F83 325 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 LRRC37BQ96QE4 947 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 PSD2Q9BQI7 771 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 NAA11Q9BSU3 229 aaPredicted RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 OR11A1Q9GZK7 315 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 OPN3Q9H1Y3 402 aaPredicted RBP9.53□□□□□ -0.88
LINC00239-201ENST00000556973 BCO1Q9HAY6 547 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 TMEM27Q9HBJ8 222 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 FANCFQ9NPI8 374 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 GALNT8Q9NY28 637 aa9.53□□□□□ -0.88
LINC00239-201ENST00000556973 ELOVL7A1L3X0 281 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ZC3H12DA2A288 527 aaKnown RBP9.52□□□□□ -0.89
LINC00239-201ENST00000556973 TUBAL3A6NHL2 446 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ELOA3DA6NLF2 546 aaPredicted RBP9.52□□□□□ -0.89
LINC00239-201ENST00000556973 CCT8L1PA6NM43 557 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 CYSRT1A8MQ03 144 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ZNF724A8MTY0 619 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 FMO6PO60774 539 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 OPN1SWP03999 348 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 GPIP06744 558 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 IMPDH2P12268 514 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 PRF1P14222 555 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 POU2F1P14859 743 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 HTR2AP28223 471 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 KDELR2P33947 212 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 IDUAP35475 653 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 CD79BP40259 229 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 NUDT2P50583 147 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 NCALDP61601 193 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 H3F3AP84243 136 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 PTPN13Q12923 2485 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 BNIP2Q12982 314 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 CEACAM7Q14002 265 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 OR1Q1Q15612 314 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ELOA3BQ3SY89 546 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ALG10BQ5I7T1 473 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 GKAP1Q5VSY0 366 aaPredicted RBP9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ZNF474Q6S9Z5 364 aaPredicted RBP9.52□□□□□ -0.89
LINC00239-201ENST00000556973 C5orf46Q6UWT4 87 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 C6orf89Q6UWU4 347 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 STK32CQ86UX6 486 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 MICU2Q8IYU8 434 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 GPR32P1Q8NGA4 272 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 FAM222BQ8WU58 562 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 SLC38A4Q969I6 547 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 TAMM41Q96BW9 452 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 SLC47A1Q96FL8 570 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ARHGDIGQ99819 225 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 CMTM6Q9NX76 183 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 SELENONQ9NZV5 590 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 NDRG3Q9UGV2 375 aa9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ING1Q9UK53 422 aaPredicted RBP9.52□□□□□ -0.89
LINC00239-201ENST00000556973 ADAM21Q9UKJ8 722 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms