RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RCN3Q96D15 328 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 MCCC2Q9HCC0 563 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 ELOVL5Q9NYP7 299 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 KLHL9Q9P2J3 617 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 TRAPPC4Q9Y296 219 aa20.38■□□□□ 0.85
TDP1-216ENST00000556867 TUBAL3A6NHL2 446 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 GCM2O75603 506 aaPredicted RBP20.37■□□□□ 0.85
TDP1-216ENST00000556867 COX4I1P13073 169 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 KLK2P20151 261 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 CXCR1P25024 350 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 CD79BP40259 229 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 HOXC5Q00444 222 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 DMTNQ08495 405 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 VMACQ2NL98 169 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 GLIPR1L2Q4G1C9 344 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 TMEM201Q5SNT2 666 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 INTS11Q5TA45 600 aaKnown RBP20.37■□□□□ 0.85
TDP1-216ENST00000556867 ABLIM2Q6H8Q1 611 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 CPLX4Q7Z7G2 160 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 ZHX1-C8orf76Q96EF9 292 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 ECSITQ9BQ95 431 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 PSD2Q9BQI7 771 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 EVA1AQ9H8M9 152 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 BCO1Q9HAY6 547 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 TMEM181Q9P2C4 612 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 ING1Q9UK53 422 aaPredicted RBP20.37■□□□□ 0.85
TDP1-216ENST00000556867 LRBAP50851 2863 aa20.37■□□□□ 0.85
TDP1-216ENST00000556867 ZC3H12DA2A288 527 aaKnown RBP20.36■□□□□ 0.85
TDP1-216ENST00000556867 PATL1Q86TB9 770 aaKnown RBP20.36■□□□□ 0.85
TDP1-216ENST00000556867 ATG4DQ86TL0 474 aaPredicted RBP20.36■□□□□ 0.85
TDP1-216ENST00000556867 TREML1Q86YW5 311 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 TUSC5Q8IXB3 177 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 LSMEM1Q8N8F7 131 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 POTEKPQ9BYX7 375 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 MYLK2Q9H1R3 596 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 KLHL28Q9NXS3 571 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 TESQ9UGI8 421 aaKnown RBP20.36■□□□□ 0.85
TDP1-216ENST00000556867 SLC13A4Q9UKG4 626 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 FREM1Q5H8C1 2179 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 TACC2O95359 2948 aa20.36■□□□□ 0.85
TDP1-216ENST00000556867 TMEM229AB2RXF0 380 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 M0QX08 132 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 YES1P07947 543 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 IMPDH2P12268 514 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 POU2F1P14859 743 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 FAM27E3Q08E93 113 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 RASGEF1BQ0VAM2 473 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 PDK3Q15120 406 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 C6orf89Q6UWU4 347 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 DNAJA3Q96EY1 480 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 PIF1Q9H611 641 aa20.35■□□□□ 0.85
TDP1-216ENST00000556867 ZNF724A8MTY0 619 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 A8MVM7 634 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 OPN1SWP03999 348 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 C8BP07358 591 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 EPXP11678 715 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 HTR2AP28223 471 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 CCKARP32238 428 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 RGS8P57771 180 aaPredicted RBP20.34■□□□□ 0.85
TDP1-216ENST00000556867 OR2B6P58173 313 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 SLC35A1P78382 337 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 ERICH5Q6P6B1 374 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 CCDC80Q76M96 950 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 NUFIP2Q7Z417 695 aaKnown RBP20.34■□□□□ 0.85
TDP1-216ENST00000556867 ARPINQ7Z6K5 226 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 STK32CQ86UX6 486 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 LSRQ86X29 649 aaPredicted RBP20.34■□□□□ 0.85
TDP1-216ENST00000556867 SMYD1Q8NB12 490 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 GPR32P1Q8NGA4 272 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 LINC01560Q8TB33 94 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 LURAP1Q96LR2 239 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 ZNF583Q96ND8 569 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 TRIM2Q9C040 744 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 C12orf49Q9H741 205 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 C12orf10Q9HB07 376 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 RPS6KB2Q9UBS0 482 aa20.34■□□□□ 0.85
TDP1-216ENST00000556867 IGKV3D-15A0A087WSY6 115 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 EIF1BO60739 113 aaKnown RBP20.33■□□□□ 0.85
TDP1-216ENST00000556867 NPIPB7O75200 414 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 LGI1O95970 557 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 IDUAP35475 653 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 UGT2B10P36537 528 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 KCNJ5P48544 419 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 NCALDP61601 193 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 H3F3AP84243 136 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 BNIP2Q12982 314 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 VEZF1Q14119 521 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 DAZAP2Q15038 168 aaPredicted RBP20.33■□□□□ 0.85
TDP1-216ENST00000556867 DUSP7Q16829 419 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 TFAP2EQ6VUC0 442 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 BEND4Q6ZU67 534 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 OR52E4Q8NGH9 312 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 PIGXQ8TBF5 258 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 STK35Q8TDR2 534 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 TAMM41Q96BW9 452 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 DACH2Q96NX9 599 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 ZNF300Q96RE9 604 aaPredicted RBP20.33■□□□□ 0.85
TDP1-216ENST00000556867 GPATCH1Q9BRR8 931 aaKnown RBP20.33■□□□□ 0.85
TDP1-216ENST00000556867 TESMINQ9Y4I5 508 aa20.33■□□□□ 0.85
TDP1-216ENST00000556867 ABCA4P78363 2273 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms